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Zm-Mo17-REFERENCE-CAU-T2T-assembly

Organism name:
Zea mays (maize)
Infraspecific name:
Cultivar: Mo17-2021
BioSample:
SAMN20854702
BioProject:
PRJNA751841
Submitter:
China Agriculture University
Date:
2022/02/10
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_022117705.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JAIRCI01
Assembly method:
NextDenovo v. 2.2-beta.0; Hifiasm v. 0.7
Expected final version:
yes
Genome coverage:
200.0x
Sequencing technology:
Oxford Nanopore PromethION; PacBio

IDs: 12115441 [UID] 31754658 [GenBank]

See Genome Information for Zea mays

There are 109 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length2,178,604,320
Total ungapped length2,178,604,320
Total number of chromosomes and plasmids10

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_022117715.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CM039150.1n/an/a
Chromosome 2CM039151.1n/an/a
Chromosome 3CM039152.1n/an/a
Chromosome 4CM039153.1n/an/a
Chromosome 5CM039154.1n/an/a
Chromosome 6CM039155.1n/an/a
Chromosome 7CM039156.1n/an/a
Chromosome 8CM039157.1n/an/a
Chromosome 9CM039158.1n/an/a
Chromosome 10CM039159.1n/an/a

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All2,178,604,320102,178,604,320220,303,00200
Chromosome 1307,335,8091307,335,809307,335,80900
Chromosome 2247,431,0271247,431,027247,431,02700
Chromosome 3242,843,9741242,843,974242,843,97400
Chromosome 4251,128,3941251,128,394251,128,39400
Chromosome 5220,303,0021220,303,002220,303,00200
Chromosome 6201,729,0041201,729,004201,729,00400
Chromosome 7181,266,3061181,266,306181,266,30600
Chromosome 8208,583,2951208,583,295208,583,29500
Chromosome 9168,156,8891168,156,889168,156,88900
Chromosome 10149,826,6201149,826,620149,826,62000