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ASM3001377v1

Organism name:
Trichechus manatus latirostris (Florida manatee)
BioSample:
SAMN00632092
BioProject:
PRJNA939417
Submitter:
Consejo Superior de Investigaciones Cientificas (CSIC)
Date:
2023/05/15
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_030013775.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
JARVKP01
Assembly method:
Flye assembler v. 2.8.1
Expected final version:
no
Genome coverage:
27.0x
Sequencing technology:
Oxford Nanopore; Illumina

IDs: 16614291 [UID] 42745958 [GenBank]

See Genome Information for Trichechus manatus

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length3,088,727,998
Total ungapped length3,088,725,336
Gaps between scaffolds0
Number of scaffolds15,608
Scaffold N50488,962
Scaffold L501,801
Number of contigs15,641
Contig N50486,872
Contig L501,809
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)15,608

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,088,716,60015,6043,088,713,938488,962330
MoleculeSequence RoleTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MTAllAssembled moleculeUnlocalized scaffolds11,398011,39840411,398011,3983,86503,865000000