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ASM3440671v1

Organism name:
Rhodotorula mucilaginosa (basidiomycete fungi)
Infraspecific name:
Strain: GDMCC2.30
BioSample:
SAMN38071299
BioProject:
PRJNA1034680
Submitter:
South China Agricultural University
Date:
2023/12/15
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_034406715.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
Flye v. 2.9.1; nextPolish v. 1.4.0
Expected final version:
yes
Genome coverage:
300.0x
Sequencing technology:
PacBio Sequel; Illumina NextSeq

IDs: 20234411 [UID] 51209218 [GenBank]

See Genome Information for Rhodotorula mucilaginosa

There are 118 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length20,354,758
Total ungapped length20,354,758
Total number of chromosomes and plasmids19

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCA_034406725.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 1CP137864.1n/an/a
Chromosome 2CP137865.1n/an/a
Chromosome 3CP137866.1n/an/a
Chromosome 4CP137867.1n/an/a
Chromosome 5CP137868.1n/an/a
Chromosome 6CP137869.1n/an/a
Chromosome 7CP137870.1n/an/a
Chromosome 8CP137871.1n/an/a
Chromosome 9CP137872.1n/an/a
Chromosome 10CP137873.1n/an/a
Chromosome 11CP137874.1n/an/a
Chromosome 12CP137875.1n/an/a
Chromosome 13CP137876.1n/an/a
Chromosome 14CP137877.1n/an/a
Chromosome 15CP137878.1n/an/a
Chromosome 16CP137879.1n/an/a
Chromosome 17CP137880.1n/an/a
Chromosome 18CP137881.1n/an/a

Assembly statistics

MoleculeTotal
Length
All20,314,606
Chromosome 12,228,820
Chromosome 21,589,316
Chromosome 31,579,984
Chromosome 41,495,012
Chromosome 51,443,159
Chromosome 61,439,174
Chromosome 71,363,337
Chromosome 81,287,795
Chromosome 91,231,870
Chromosome 101,023,225
Chromosome 11934,276
Chromosome 12828,085
Chromosome 13761,891
Chromosome 14686,380
Chromosome 15682,513
Chromosome 16678,587
Chromosome 17556,966
Chromosome 18504,216
MoleculeTotal
Length
Mitochondrion MT40,152