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Zm-Tx303-REFERENCE-NAM-1.0

Organism name:
Zea mays (maize)
Infraspecific name:
Cultivar: Tx303
BioSample:
SAMEA5313321
BioProject:
PRJEB31061
Submitter:
MaizeGDB
Date:
2020/03/21
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_902167205.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
CABHLQ01
Genome coverage:
71x

IDs: 6455741 [UID] 18105898 [GenBank]

See Genome Information for Zea mays

There are 109 assemblies for this organism

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History (Show revision history)

Comment

whole genome assembly of NAM founder line Tx303

Global statistics

Total sequence length2,215,809,567
Total ungapped length2,208,842,627
Gaps between scaffolds0
Number of scaffolds1,045
Scaffold N50222,495,651
Scaffold L505
Number of contigs2,053
Contig N5028,016,142
Contig L5025
Total number of chromosomes and plasmids10
Number of component sequences (WGS or clone)1,067

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_902167204.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1LR631172.1n/an/a0
Chromosome 2LR631173.1n/an/a0
Chromosome 3LR631174.1n/an/a0
Chromosome 4LR631175.1n/an/a0
Chromosome 5LR631176.1n/an/a0
Chromosome 6LR631177.1n/an/a0
Chromosome 7LR631178.1n/an/a0
Chromosome 8LR631179.1n/an/a0
Chromosome 9LR631180.1n/an/a0
Chromosome 10LR631181.1n/an/a0
unplacedn/an/an/a1,035

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All2,215,809,5671,0452,208,842,627222,495,6511,0080
Chromosome 1303,581,8471302,278,673303,581,8471880
Chromosome 2250,328,1781249,477,589250,328,178870
Chromosome 3240,204,7061240,050,907240,204,706430
Chromosome 4251,540,1051251,492,974251,540,105170
Chromosome 5222,495,6511221,708,109222,495,6511000
Chromosome 6172,039,8241170,725,649172,039,8241300
Chromosome 7181,258,9411180,920,592181,258,941320
Chromosome 8182,745,7941182,703,135182,745,794250
Chromosome 9168,053,0211167,601,055168,053,021680
Chromosome 10152,699,1911152,466,139152,699,191540
unplaced90,862,3091,03589,417,80596,8312640