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Source database (GenBank or RefSeq) File type

SRR11489760_bin.5_metaWRAP_v1.3_MAG

Organism name:

Actinobacillus porcitonsillarum (g-proteobacteria)

Taxonomy check:

Inconclusive

Isolate:

SRR11489760_bin.5_metaWRAP_v1.3_MAG

BioSample:

SAMEA110411807

BioProject:

PRJEB53600

Submitter:

EMG

Date:

2022/09/10

Assembly type:

Assembly level:

Contig

Genome representation:

full

Excluded from RefSeq:

derived from metagenome

GenBank assembly accession:

GCA_945947995.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

WGS Project:

CAMEZR01

Genome coverage:

157x

IDs: 13797301 [UID] 35899198 [GenBank]

See Genome Information for Actinobacillus porcitonsillarum

Pathogen Detection Resources

There are 6 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_945947995.1	n/a	n/a	SRR11489760_bin.5_metaWRAP_v1.3_MAG	Contig	Latest GenBank

Comment

This is an EMG-produced Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP138410. This sample represents a Metagenome-Assembled Genome (MAG) from the metagenomic run SRR11489760.

Global statistics

Total sequence length	1,873,059
Total ungapped length	1,873,059
Number of contigs	191
Contig N50	17,605
Contig L50	29
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	191

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	94.32	83.40	64.41

Assembly

Genome Assembly

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Download Assembly

SRR11489760_bin.5_metaWRAP_v1.3_MAG

See Genome Information for Actinobacillus porcitonsillarum

Pathogen Detection Resources

There are 6 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Global assembly definition

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Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result