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Source database (GenBank or RefSeq) File type

odPetFici3.uC_Entotheonella_sp_1.1

Organism name:

uncultured Candidatus Entotheonella sp. (bacteria)

Taxonomy check:

Inconclusive

Isolate:

26b0520c-cf9d-432e-a440-87a3e388b1d5

BioSample:

SAMEA113399362

BioProject:

PRJEB63040

Submitter:

WELLCOME SANGER INSTITUTE

Date:

2023/06/13

Assembly type:

Assembly level:

Complete Genome

Genome representation:

full

Excluded from RefSeq:

derived from metagenome

GenBank assembly accession:

GCA_951828535.1 (latest)

RefSeq assembly accession:

n/a

RefSeq assembly and GenBank assembly identical:

n/a

Assembly method:

various

Genome coverage:

25x

Sequencing technology:

PacBio,Arima

IDs: 16865451 [UID] 43318088 [GenBank]

See Genome Information for uncultured Candidatus Entotheonella sp.

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_951828535.1	n/a	n/a	odPetFici3.uC_Entotheonella_sp_1.1	Complete Genome	Latest GenBank

Comment

The metagenome-assembled genome assembly odPetFici3.uC_Entotheonella_sp_1.1 is based on 25x PacBio data and Arima Hi-C data generated by the Aquatic Symbiosis Genomics Project (https://www.aquaticsymbiosisgenomics.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm and ... coverage-, graph-, and HiC-based contig binning.  more

Global statistics

Total sequence length	3,617,904
Total ungapped length	3,617,904
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	78.78	0.07	0.05

Assembly

Genome Assembly

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Download Assembly

odPetFici3.uC_Entotheonella_sp_1.1

See Genome Information for uncultured Candidatus Entotheonella sp.

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Information

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Global assembly definition

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Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result