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ERR10960907_bin.4_MetaWRAP_v1.3_MAG

Organism name:
Acidaminococcus massiliensis (firmicutes)
Taxonomy check:
OK
Isolate:
ERR10960907_bin.4_MetaWRAP_v1.3_MAG
BioSample:
SAMEA114061472
BioProject:
PRJEB62839
Submitter:
EMG
Date:
2023/07/16
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
Excluded from RefSeq:
  • annotation fails MAG completeness check
  • derived from metagenome
GenBank assembly accession:
GCA_958347805.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
CATVWS01
Assembly method:
metaspades v3.15.3
Genome coverage:
13x
Sequencing technology:
Illumina NovaSeq 6000

IDs: 17615901 [UID] 45153048 [GenBank]

See Genome Information for Acidaminococcus massiliensis

Pathogen Detection Resources

There are 10 assemblies for this organism

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History (Show revision history)

Comment

This is an EMG-produced Third Party Annotation (TPA) bin derived from the primary whole genome shotgun (WGS) data set ERP137488. This sample represents a Metagenome-Assembled Genome (MAG) from the metagenomic run ERR10960907.

Global statistics

Total sequence length2,135,608
Total ungapped length2,135,608
Number of contigs284
Contig N508,966
Contig L5071
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)284

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,135,6082842,135,6088,96600

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Acidaminococcus massiliensisAcidaminococcus massiliensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_900095825.1Acidaminococcus massiliensistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_900095825.1Acidaminococcus massiliensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.8388.9971.20
Best-match type98.8388.9971.20

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna