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ASM17851v1

Organism name:
Actinobacillus pleuropneumoniae serovar 2 str. S1536 (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: S1536
BioSample:
SAMN02469622
BioProject:
PRJNA47293
Submitter:
Huazhong Agricultural University
Date:
2010/09/13
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000178515.1 (latest)
RefSeq assembly accession:
GCF_000178515.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
ADOE01
Assembly method:
Newbler v. 2.3
Genome coverage:
13.6x
Sequencing technology:
454

IDs: 224998 [UID] 224978 [GenBank] 224998 [RefSeq]

See Genome Information for Actinobacillus pleuropneumoniae

Pathogen Detection Resources

There are 88 assemblies for this organism

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History (Show revision history)

Comment

Bacteria avilable from Dr. Rui Zhou

Global statistics

Total sequence length2,218,721
Total ungapped length2,218,721
Number of contigs56
Contig N5066,037
Contig L5012
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)56

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Assembly Information

Related Information

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length		Contig
Count		Ungapped
Length		Contig
N50		Spanned
Gaps		Unspanned
Gaps
unplaced2,218,721562,218,72166,03700

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Actinobacillus pleuropneumoniae serovar 2 str. S1536Actinobacillus pleuropneumoniae

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000178495.2Actinobacillus pleuropneumoniae serovar 1 str. 4074type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000178495.2Actinobacillus pleuropneumoniaetype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.1595.9091.77
Best-match type98.1595.9091.77

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna