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ASM70074v1

  • Anomalous assembly.
Organism name:
Antrostomus carolinensis (chuck-will's-widow)
Isolate:
BGI_N321
Sex:
male
BioSample:
SAMN02318612
BioProject:
PRJNA212888
Submitter:
BGI
Date:
2014/06/10
Assembly level:
Scaffold
Genome representation:
full
Assembly anomaly:
contaminated
Excluded from RefSeq:
  • contaminated
GenBank assembly accession:
GCA_000700745.1 (replaced)
RefSeq assembly accession:
GCF_000700745.1 (replaced)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JMFU01
Assembly method:
SOAPdenovo v. 1.6
Genome coverage:
30x
Sequencing technology:
Illumina HiSeq

IDs: 183551 [UID] 1106058 [GenBank] 1367398 [RefSeq]

See Genome Information for Antrostomus carolinensis

History (Show revision history)

Comment

In May 2022 1575 sequences were suppressed because they were found to be contaminants.

Global statistics

Total sequence length1,119,683,066
Total ungapped length1,115,277,614
Gaps between scaffolds0
Number of scaffolds70,122
Scaffold N5046,345
Scaffold L506,762
Number of contigs126,789
Contig N5022,156
Contig L5014,874
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)126,789

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,119,683,06670,1221,115,277,61446,34556,6670