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ASM83064v1

Organism name:
Bacillus subtilis (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: B4146
BioSample:
SAMN03174425
BioProject:
PRJNA266797
Submitter:
TIFN
Date:
2015/02/02
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000830645.1 (latest)
RefSeq assembly accession:
GCF_000830645.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JXHR01
Assembly method:
Velvet v. 1.2.10
Expected final version:
yes
Genome coverage:
313.0x
Sequencing technology:
Illumina HiSeq

IDs: 249101 [UID] 1508348 [GenBank] 1579188 [RefSeq]

See Genome Information for Bacillus subtilis

There are 1053 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length4,181,155
Total ungapped length4,179,284
Gaps between scaffolds0
Number of scaffolds33
Scaffold N50324,560
Scaffold L505
Number of contigs58
Contig N50208,848
Contig L509
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)33

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,181,155334,179,284324,560250

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacillus subtilisBacillus subtilis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000009045.1Bacillus subtilis subsp. subtilis str. 168type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000009045.1Bacillus subtilistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type98.5490.6589.87
Best-match type98.5490.6589.87

ANI result

Taxonomy check statusBest match statusComment
OKderived-species-matchna