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ASM126359v1

Organism name:
Phalaenopsis equestris (monocots)
BioSample:
SAMN02046388
BioProject:
PRJNA192198
Submitter:
BGI-SZ
Date:
2015/08/07
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001263595.1 (latest)
RefSeq assembly accession:
GCF_001263595.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome Pltd
  • Data displayed for RefSeq version
WGS Project:
APLD01
Assembly method:
SOAPdenovo v. 2.2
Genome coverage:
99.5x
Sequencing technology:
Illumina HiSeq

IDs: 469911 [UID] 2202138 [GenBank] 4345348 [RefSeq]

See Genome Information for Phalaenopsis equestris

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length1,064,200,343
Total ungapped length983,700,023
Gaps between scaffolds0
Number of scaffolds89,584
Scaffold N50378,442
Scaffold L50493
Number of contigs188,398
Contig N5021,149
Contig L5012,816
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)188,398

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced1,064,051,38489,583983,551,064378,44298,8140
MoleculeTotal
Length
Chloroplast Pltd148,959