Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

ASM270686v3

Organism name:

Spodoptera litura (moths)

Infraspecific name:

Strain: Ishihara

Sex:

male

BioSample:

SAMN05845584

BioProject:

PRJNA344815

Submitter:

Southwest University

Date:

2017/10/25

Release type:

minor

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_002706865.3 (latest)

RefSeq assembly accession:

GCF_002706865.2 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

MTZO01

Assembly method:

AllPaths v. 47758

Expected final version:

Genome coverage:

111.0x

Sequencing technology:

Illumina HiSeq

IDs: 12657831 [UID] 33123618 [GenBank] 33123638 [RefSeq]

See Genome Information for Spodoptera litura

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_002706865.3	≠	GCF_002706865.2	ASM270686v3	Chromosome	Latest GenBank, Latest RefSeq
GCA_002706865.2	n/a	n/a	ASM270686v2	Chromosome	Replaced GenBank
GCA_002706865.1	≠	GCF_002706865.1	ASM270686v1	Chromosome	Replaced GenBank, Replaced RefSeq

Comment

Annotation was added to the scaffolds in May 2019
In May 2022 1223 sequences were suppressed because they were found to be contaminants.

Global statistics

Total sequence length	429,583,062
Total ungapped length	418,683,849
Gaps between scaffolds	623
Number of scaffolds	2,397
Scaffold N50	929,586
Scaffold L50	139
Number of contigs	12,414
Contig N50	68,785
Contig L50	1,751
Total number of chromosomes and plasmids	32
Number of component sequences (WGS or clone)	12,414

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM008392.1	=	NC_036187.1	0
Chromosome 2	CM008393.1	=	NC_036188.1	0
Chromosome 3	CM008394.1	=	NC_036189.1	0
Chromosome 4	CM008395.1	=	NC_036190.1	0
Chromosome 5	CM008396.1	=	NC_036191.1	0
Chromosome 6	CM008397.1	=	NC_036192.1	0
Chromosome 7	CM008398.1	=	NC_036193.1	0
Chromosome 8	CM008399.1	=	NC_036194.1	0
Chromosome 9	CM008400.1	=	NC_036195.1	0
Chromosome 10	CM008401.1	=	NC_036196.1	0
Chromosome 11	CM008402.1	=	NC_036197.1	0
Chromosome 12	CM008403.1	=	NC_036198.1	0
Chromosome 13	CM008404.1	=	NC_036199.1	0
Chromosome 14	CM008405.1	=	NC_036200.1	0
Chromosome 15	CM008406.1	=	NC_036201.1	0
Chromosome 16	CM008407.1	=	NC_036202.1	0
Chromosome 17	CM008408.1	=	NC_036203.1	0
Chromosome 18	CM008409.1	=	NC_036204.1	0
Chromosome 19	CM008410.1	=	NC_036205.1	0
Chromosome 20	CM008411.1	=	NC_036206.1	0
Chromosome 21	CM008412.1	=	NC_036207.1	0
Chromosome 22	CM008413.1	=	NC_036208.1	0
Chromosome 23	CM008414.1	=	NC_036209.1	0
Chromosome 24	CM008415.1	=	NC_036210.1	0
Chromosome 25	CM008416.1	=	NC_036211.1	0
Chromosome 26	CM008417.1	=	NC_036212.1	0
Chromosome 27	CM008418.1	=	NC_036213.1	0
Chromosome 28	CM008419.1	=	NC_036214.1	0
Chromosome 29	CM008420.1	=	NC_036215.1	0
Chromosome 30	CM008421.1	=	NC_036216.1	0
Chromosome Z	CM008422.1	=	NC_036217.1	0
unplaced	n/a	n/a	n/a	1,742

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	429,567,674	2,396	418,668,461	929,586	10,017	623
Chromosome 1	13,549,330	20	13,171,327	1,068,593	328	19
Chromosome 2	15,431,534	24	15,048,681	807,774	303	23
Chromosome 3	6,464,562	21	6,152,538	940,613	301	20
Chromosome 4	10,322,184	21	10,126,739	1,051,052	206	20
Chromosome 5	11,898,354	22	11,459,220	784,366	403	21
Chromosome 6	13,462,776	22	13,172,232	832,986	247	21
Chromosome 7	15,485,697	30	15,138,992	1,116,738	347	29
Chromosome 8	12,421,978	20	12,075,284	1,141,508	323	19
Chromosome 9	14,936,934	32	14,622,456	827,093	291	31
Chromosome 10	8,563,055	19	8,255,418	847,414	292	18
Chromosome 11	13,300,942	22	13,043,877	875,387	276	21
Chromosome 12	10,476,686	32	10,192,060	526,053	270	31
Chromosome 13	7,352,807	18	7,088,822	694,395	304	17
Chromosome 14	15,640,866	28	15,324,715	961,150	281	27
Chromosome 15	13,926,079	20	13,663,719	1,043,824	244	19
Chromosome 16	16,271,522	22	15,946,780	1,001,294	297	21
Chromosome 17	13,592,034	20	13,276,371	1,407,888	291	19
Chromosome 18	12,191,718	30	11,814,367	602,982	320	29
Chromosome 19	8,193,894	14	7,840,495	1,317,221	334	13
Chromosome 20	13,628,927	19	13,358,068	1,176,446	288	18
Chromosome 21	14,208,890	15	13,912,023	1,788,469	282	14
Chromosome 22	14,271,416	15	13,910,626	1,824,188	314	14
Chromosome 23	13,880,142	22	13,563,835	856,023	302	21
Chromosome 24	12,202,122	20	11,816,930	1,047,643	335	19
Chromosome 25	13,683,143	29	13,395,491	848,688	280	28
Chromosome 26	10,229,445	14	9,979,406	1,103,994	243	13
Chromosome 27	14,619,091	20	14,354,154	1,020,445	282	19
Chromosome 28	13,457,605	13	13,171,762	1,314,443	278	12
Chromosome 29	14,213,186	18	13,883,929	1,198,327	297	17
Chromosome 30	13,013,156	17	12,688,523	1,028,195	308	16
Chromosome Z	18,934,769	15	18,657,140	1,714,816	265	14
unplaced	29,742,830	1,742	28,562,481	115,320	885	0

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Send to:

Download Assembly

ASM270686v3

See Genome Information for Spodoptera litura

Pathogen Detection Resources

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

PubMed articles for this assembly

Recent activity

Global assembly definition

Assembly statistics

Assembly Unit Name
Primary Assembly
non-nuclear