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Source database (GenBank or RefSeq) File type

ASM396351v1

Organism name:: Brevibacillus marinus (firmicutes)
Taxonomy check:: OK
Infraspecific name:: Strain: SCSIO 07484
BioSample:: SAMN10587570
BioProject:: PRJNA509738
Submitter:: South China Sea Institute of Oceanology
Date:: 2018/12/23
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
RefSeq category:: representative genome
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_003963515.1 (latest)
RefSeq assembly accession:: GCF_003963515.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Assembly method:: FALCON v. 0.3.0; Celera Assembler v. 8.3
Expected final version:: yes
Genome coverage:: 913.0x
Sequencing technology:: PacBio Sequel; Illumina

IDs: 2177091 [UID] 8115848 [GenBank] 8153678 [RefSeq]

See Genome Information for Brevibacillus marinus

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_003963515.1	=	GCF_003963515.1	ASM396351v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Name::GCF_003963515.1-RS_2024_04_01
Annotation Date::04/01/2024 03:13:28
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::3,915
CDSs (total)::3,807
Genes (coding)::3,745
CDSs (with protein)::3,745
Genes (RNA)::108
rRNAs::7, 7, 7 (5S, 16S, 23S)
complete rRNAs::7, 7, 7 (5S, 16S, 23S)
tRNAs::83
ncRNAs::4
Pseudo Genes (total)::62
CDSs (without protein)::62
Pseudo Genes (ambiguous residues)::0 of 62
Pseudo Genes (frameshifted)::26 of 62
Pseudo Genes (incomplete)::41 of 62
Pseudo Genes (internal stop)::11 of 62
Pseudo Genes (multiple problems)::14 of 62
CRISPR Arrays::4
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	4,079,826
Total ungapped length	4,079,826
Total number of chromosomes and plasmids	2

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	CP034541.1	=	NZ_CP034541.1
Plasmid unnamed	CP034542.1	=	NZ_CP034542.1

Molecule	Total Length
All	4,079,826
Chromosome	3,978,392
Plasmid unnamed	101,434

	ANI	Query coverage	Subject coverage
Declared type	na	na	na
Best-match type	81.69	19.11	15.88

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ASM396351v1

See Genome Information for Brevibacillus marinus

Pathogen Detection Resources

History (Show revision history)

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Genome-Annotation-Data

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