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ASM1307630v1

Organism name:
Rhopilema esculentum (jellyfishes)
Isolate:
edhc-2017
BioSample:
SAMN11479163
BioProject:
PRJNA505074
Submitter:
The Chinese University of Hong Kong
Date:
2020/05/13
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_013076305.1 (latest)
RefSeq assembly accession:
GCF_013076305.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: non-nuclear assembly-unit
  • Data displayed for RefSeq version
WGS Project:
SWAQ01
Assembly method:
HiRise v. Aug-2018
Expected final version:
yes
Genome coverage:
17177.2x
Sequencing technology:
Illumina; HiC; Chicago

IDs: 7114411 [UID] 19554128 [GenBank] 56748118 [RefSeq]

See Genome Information for Rhopilema esculentum

There are 4 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length256,705,438
Total ungapped length256,421,684
Gaps between scaffolds0
Number of scaffolds1,682
Scaffold N5012,930,448
Scaffold L509
Number of contigs4,511
Contig N50195,514
Contig L50393
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)1,682

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced256,689,5831,681256,405,83912,930,4482,8280
MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MT15,855115,84515,85510