VT_AalbS3_pri_1.0

Organism name:: Anopheles albimanus (mosquitos)
Infraspecific name:: Strain: STELCA
Sex:: female
BioSample:: SAMN14582895
BioProject:: PRJNA622927
Submitter:: None
Date:: 2020/08/06
Assembly type:: haploid (principal pseudohaplotype of diploid)
Assembly level:: Chromosome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_013758885.1 (latest)
RefSeq assembly accession:: GCF_013758885.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JABUIU01
Assembly method:: Canu v. 1.3
Expected final version:: yes
Genome coverage:: 120.0x
Sequencing technology:: Oxford Nanopore MinION; Illumina HiSeq; Bionano DLS; Hi-C

IDs: 7825061 [UID] 21450638 [GenBank] 21627378 [RefSeq]

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_013758885.1	=	GCF_013758885.1	VT_AalbS3_pri_1.0	Chromosome	Latest GenBank, Latest RefSeq

Total sequence length	172,602,732
Total ungapped length	170,878,982
Gaps between scaffolds	0
Number of scaffolds	7
Scaffold N50	89,049,450
Scaffold L50	1
Number of contigs	151
Contig N50	25,000,043
Contig L50	3
Total number of chromosomes and plasmids	3
Number of component sequences (WGS or clone)	7

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome X	CM024294.1	=	NC_050155.1	0
Chromosome 2	CM024292.1	=	NC_050156.1	1
Chromosome 3	CM024293.1	=	NC_050157.1	1
unplaced	n/a	n/a	n/a	2

Molecule	Sequence Role	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
All	Assembled molecule	172,602,732	7	170,878,982	89,049,450	144	0
Chromosome X	Assembled molecule	13,047,563	1	13,047,563	13,047,563	0	0
Chromosome 2	AllAssembled moleculeUnlocalized scaffolds	89,383,95289,049,450334,502	211	89,149,32488,815,322334,002	89,049,45089,049,450334,502	321	000
Chromosome 3	AllAssembled moleculeUnlocalized scaffolds	69,129,76268,172,582957,180	211	67,999,55467,046,874952,680	68,172,58268,172,582957,180	98899	000
unplaced	Assembled molecule	1,041,455	2	682,541	803,511	43	0