U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM1406632v1

Organism name:
Apis laboriosa (Himalayan honeybee)
Isolate:
Shangri-la
Sex:
female
BioSample:
SAMN15599769
BioProject:
PRJNA647849
Submitter:
Chongqing Normal University
Date:
2020/08/05
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_014066325.1 (latest)
RefSeq assembly accession:
GCF_014066325.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JACEOM01
Assembly method:
SOAPdenovo v. February-2019
Expected final version:
no
Genome coverage:
304.0x
Sequencing technology:
Illumina HiSeq

IDs: 7817591 [UID] 21430708 [GenBank] 28924968 [RefSeq]

See Genome Information for Apis laboriosa

History (Show revision history)

Comment

Global statistics

Total sequence length226,078,798
Total ungapped length225,649,628
Gaps between scaffolds0
Number of scaffolds4,377
Scaffold N503,339,770
Scaffold L5021
Number of contigs5,930
Contig N50303,790
Contig L50218
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)4,377

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced226,063,2884,376225,634,1183,339,7701,5530
MoleculeTotal
Length
Mitochondrion MT15,510