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Source database (GenBank or RefSeq) File type

ASM1654582v1

Organism name:

Eucalyptus grandis (rose gum)

Isolate:

ANBG69807.140

BioSample:

SAMN13016251

BioProject:

PRJNA509734

Submitter:

Australian National University

Date:

2021/01/06

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_016545825.1 (latest)

RefSeq assembly accession:

GCF_016545825.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT.
Different: chromosome Pltd.

Data displayed for RefSeq version

WGS Project:

JABKBJ01

Assembly method:

Canu v. 1.9

Expected final version:

Reference guided assembly:

GCA_000612305.1

Genome coverage:

25x

Sequencing technology:

Oxford Nanopore MinION

IDs: 9079181 [UID] 24462968 [GenBank] 24808318 [RefSeq]

See Genome Information for Eucalyptus grandis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_016545825.1	≠	GCF_016545825.1	ASM1654582v1	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	616,530,258
Total ungapped length	616,359,058
Gaps between scaffolds	0
Number of scaffolds	37
Scaffold N50	58,486,256
Scaffold L50	5
Number of contigs	1,749
Contig N50	613,643
Contig L50	287
Total number of chromosomes and plasmids	13
Number of component sequences (WGS or clone)	37

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM028308.1	=	NC_052612.1	0
Chromosome 2	CM028309.1	=	NC_052613.1	0
Chromosome 3	CM028310.1	=	NC_052614.1	0
Chromosome 4	CM028311.1	=	NC_052615.1	0
Chromosome 5	CM028312.1	=	NC_052616.1	0
Chromosome 6	CM028313.1	=	NC_052617.1	0
Chromosome 7	CM028314.1	=	NC_052618.1	0
Chromosome 8	CM028315.1	=	NC_052619.1	0
Chromosome 9	CM028316.1	=	NC_052620.1	0
Chromosome 10	CM028317.1	=	NC_052621.1	0
Chromosome 11	CM028318.1	=	NC_052622.1	0
unplaced	n/a	n/a	n/a	24

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	615,891,308	35	615,720,108	58,486,256	1,712
Chromosome 1	53,951,317	1	53,937,917	53,951,317	134
Chromosome 2	58,486,256	1	58,471,356	58,486,256	149
Chromosome 3	72,470,685	1	72,446,385	72,470,685	243
Chromosome 4	39,120,311	1	39,109,111	39,120,311	112
Chromosome 5	62,829,834	1	62,807,634	62,829,834	222
Chromosome 6	57,658,180	1	57,645,080	57,658,180	131
Chromosome 7	60,484,081	1	60,467,381	60,484,081	167
Chromosome 8	74,572,912	1	74,550,912	74,572,912	220
Chromosome 9	44,060,374	1	44,050,674	44,060,374	97
Chromosome 10	38,819,584	1	38,809,284	38,819,584	103
Chromosome 11	50,013,132	1	49,999,732	50,013,132	134
unplaced	3,424,642	24	3,424,642	167,275	0

Assembly

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ASM1654582v1

See Genome Information for Eucalyptus grandis

Pathogen Detection Resources

There are 3 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Unit Name
Primary Assembly
non-nuclear
non-nuclear