iqSchPice1.1

Organism name:: Schistocerca piceifrons (Central American locust)
Isolate:: TAMUIC-IGC-003096
Sex:: female
BioSample:: SAMN18214782
BioProject:: PRJNA772266
Submitter:: Behavioral Plasticity Research Institute (BPRI)
Date:: 2022/02/14
Release type:: minor
Assembly level:: Chromosome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_021461385.2 (latest)
RefSeq assembly accession:: GCF_021461385.2 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JAJNAD01
Assembly method:: HiFiASM v. 0.15.4; 3D-DNA v. 210817; Juicebox Assembly Tools v. 1.11
Expected final version:: yes
Genome coverage:: 28.0x
Sequencing technology:: PacBio Sequel; Illumina NovaSeq

IDs: 12209271 [UID] 31991118 [GenBank] 32134618 [RefSeq]

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_021461385.2	=	GCF_021461385.2	iqSchPice1.1	Chromosome	Latest GenBank, Latest RefSeq
GCA_021461385.1	n/a	n/a	iqSchPice1.1	Chromosome	Replaced GenBank

Total sequence length	8,742,459,392
Total ungapped length	8,741,999,392
Gaps between scaffolds	0
Number of scaffolds	2,493
Scaffold N50	854,032,331
Scaffold L50	5
Number of contigs	3,413
Contig N50	27,424,730
Contig L50	89
Total number of chromosomes and plasmids	13
Number of component sequences (WGS or clone)	2,493

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM038246.1	=	NC_060138.1	0
Chromosome 2	CM038247.1	=	NC_060139.1	0
Chromosome 3	CM038248.1	=	NC_060140.1	0
Chromosome 4	CM038249.1	=	NC_060141.1	0
Chromosome 5	CM038250.1	=	NC_060142.1	0
Chromosome 6	CM038251.1	=	NC_060143.1	0
Chromosome 7	CM038252.1	=	NC_060144.1	0
Chromosome 8	CM038253.1	=	NC_060145.1	0
Chromosome 9	CM038254.1	=	NC_060146.1	0
Chromosome 10	CM038255.1	=	NC_060147.1	0
Chromosome 11	CM038256.1	=	NC_060148.1	0
Chromosome X	CM038257.1	=	NC_060149.1	0
unplaced	n/a	n/a	n/a	2,480

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	8,742,443,784	2,492	8,741,983,784	854,032,331	920
Chromosome 1	1,254,751,361	1	1,254,702,361	1,254,751,361	98
Chromosome 2	1,139,481,556	1	1,139,427,056	1,139,481,556	109
Chromosome 3	964,948,601	1	964,907,101	964,948,601	83
Chromosome 4	854,032,331	1	853,989,331	854,032,331	86
Chromosome 5	718,286,410	1	718,256,410	718,286,410	60
Chromosome 6	596,601,452	1	596,586,952	596,601,452	29
Chromosome 7	603,854,611	1	603,844,111	603,854,611	21
Chromosome 8	503,543,843	1	503,528,843	503,543,843	30
Chromosome 9	228,366,969	1	228,341,469	228,366,969	51
Chromosome 10	146,943,837	1	146,937,837	146,943,837	12
Chromosome 11	180,337,593	1	180,324,093	180,337,593	27
Chromosome X	991,199,471	1	991,153,971	991,199,471	91
unplaced	560,095,749	2,480	559,984,249	666,692	223

Assembly Unit Name
Primary Assembly
non-nuclear