iqSchNite1.1

Organism name:: Schistocerca nitens (vagrant locust)
Isolate:: TAMUIC-IGC-003100
Sex:: female
BioSample:: SAMN18214786
BioProject:: PRJNA772266
Submitter:: Behavioral Plasticity Research Institute (BPRI)
Date:: 2022/06/28
Assembly level:: Chromosome
Genome representation:: full
RefSeq category:: representative genome
GenBank assembly accession:: GCA_023898315.2 (latest)
RefSeq assembly accession:: GCF_023898315.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: JAMRYH01
Assembly method:: HiFiASM v. 0.15.4; 3D-DNA v. 210817; Juicebox Assembly Tools v. 1.11
Expected final version:: yes
Genome coverage:: 30.0x
Sequencing technology:: PacBio Sequel; Illumina NovaSeq

IDs: 13199851 [UID] 34500868 [GenBank] 34594428 [RefSeq]

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_023898315.2	=	GCF_023898315.1	iqSchNite1.1	Chromosome	Latest GenBank, Latest RefSeq
GCA_023898315.1	n/a	n/a	iqSchNite1.1	Chromosome	Replaced GenBank

Total sequence length	8,822,571,301
Total ungapped length	8,822,414,264
Gaps between scaffolds	0
Number of scaffolds	512
Scaffold N50	992,907,699
Scaffold L50	4
Number of contigs	827
Contig N50	73,929,931
Contig L50	39
Total number of chromosomes and plasmids	13
Number of component sequences (WGS or clone)	512

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM043660.1	=	NC_064614.1	0
Chromosome 2	CM043661.1	=	NC_064615.1	0
Chromosome 3	CM043662.1	=	NC_064616.1	0
Chromosome 4	CM043663.1	=	NC_064617.1	0
Chromosome 5	CM043664.1	=	NC_064618.1	0
Chromosome 6	CM043665.1	=	NC_064619.1	0
Chromosome 7	CM043666.1	=	NC_064620.1	0
Chromosome 8	CM043667.1	=	NC_064621.1	0
Chromosome 9	CM043668.1	=	NC_064622.1	0
Chromosome 10	CM043669.1	=	NC_064623.1	0
Chromosome 11	CM043670.1	=	NC_064624.1	0
Chromosome 12	CM043671.1	=	NC_064625.1	0
unplaced	n/a	n/a	n/a	499

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	8,822,555,691	511	8,822,398,654	992,907,699	315
Chromosome 1	1,326,626,762	1	1,326,607,262	1,326,626,762	39
Chromosome 2	1,207,294,372	1	1,207,275,872	1,207,294,372	37
Chromosome 3	995,565,409	1	995,550,909	995,565,409	29
Chromosome 4	992,907,699	1	992,897,699	992,907,699	20
Chromosome 5	883,980,662	1	883,972,162	883,980,662	17
Chromosome 6	769,485,396	1	769,480,396	769,485,396	10
Chromosome 7	645,662,223	1	645,640,223	645,662,223	44
Chromosome 8	638,960,400	1	638,954,400	638,960,400	12
Chromosome 9	539,023,672	1	539,011,672	539,023,672	24
Chromosome 10	238,851,531	1	238,843,531	238,851,531	16
Chromosome 11	213,245,213	1	213,230,713	213,245,213	29
Chromosome 12	200,737,893	1	200,732,393	200,737,893	11
unplaced	170,214,459	499	170,201,422	7,879,749	27

Assembly Unit Name
Primary Assembly
non-nuclear