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Source database (GenBank or RefSeq) File type

MBARI_Bmic_1.0

Organism name:

Bolinopsis microptera (comb jellies)

Isolate:

Bmic1

Sex:

hermaphrodite

BioSample:

SAMN21208954

BioProject:

PRJNA759908

Submitter:

Monterey Bay Aquarium Research Institute

Date:

2022/11/14

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_026151205.1 (latest)

RefSeq assembly accession:

GCF_026151205.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in GenBank: chromosome MT

Data displayed for RefSeq version

WGS Project:

JAIOUN01

Assembly method:

wtdbg2 v. 2.5

Expected final version:

Genome coverage:

108.0x

Sequencing technology:

PacBio Sequel; Illumina HiSeq

IDs: 14401481 [UID] 37374548 [GenBank] 54911008 [RefSeq]

See Genome Information for Bolinopsis microptera

Pathogen Detection Resources

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_026151205.1	≠	GCF_026151205.1	MBARI_Bmic_1.0	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	265,435,384
Total ungapped length	265,414,284
Gaps between scaffolds	0
Number of scaffolds	346
Scaffold N50	20,825,282
Scaffold L50	6
Number of contigs	557
Contig N50	3,068,845
Contig L50	25
Total number of chromosomes and plasmids	13
Number of component sequences (WGS or clone)	346

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM047403.1	=	NC_087072.1	0
Chromosome 2	CM047404.1	=	NC_087073.1	0
Chromosome 3	CM047405.1	=	NC_087074.1	0
Chromosome 4	CM047406.1	=	NC_087075.1	0
Chromosome 5	CM047407.1	=	NC_087076.1	0
Chromosome 6	CM047408.1	=	NC_087077.1	0
Chromosome 7	CM047409.1	=	NC_087078.1	0
Chromosome 8	CM047410.1	=	NC_087079.1	0
Chromosome 9	CM047411.1	=	NC_087080.1	0
Chromosome 10	CM047412.1	=	NC_087081.1	0
Chromosome 11	CM047413.1	=	NC_087082.1	0
Chromosome 12	CM047414.1	=	NC_087083.1	0
Chromosome 13	CM047415.1	=	NC_087084.1	0
unplaced	n/a	n/a	n/a	333

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	265,435,384	346	265,414,284	20,825,282	211
Chromosome 1	26,206,493	1	26,204,193	26,206,493	23
Chromosome 2	23,028,209	1	23,027,109	23,028,209	11
Chromosome 3	21,284,423	1	21,282,323	21,284,423	21
Chromosome 4	16,326,010	1	16,324,610	16,326,010	14
Chromosome 5	23,637,599	1	23,636,299	23,637,599	13
Chromosome 6	20,932,313	1	20,931,413	20,932,313	9
Chromosome 7	20,109,789	1	20,108,589	20,109,789	12
Chromosome 8	18,467,570	1	18,465,970	18,467,570	16
Chromosome 9	17,428,893	1	17,427,493	17,428,893	14
Chromosome 10	18,271,524	1	18,269,524	18,271,524	20
Chromosome 11	20,825,282	1	20,822,782	20,825,282	25
Chromosome 12	15,202,596	1	15,201,396	15,202,596	12
Chromosome 13	16,350,194	1	16,348,094	16,350,194	21
unplaced	7,364,489	333	7,364,489	31,258	0

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MBARI_Bmic_1.0

See Genome Information for Bolinopsis microptera

Pathogen Detection Resources

History (Show revision history)

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