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Source database (GenBank or RefSeq) File type

HAU_Mang_1.0

Organism name:

Misgurnus anguillicaudatus (oriental weatherfish)

Isolate:

BS_2022a

Sex:

female

BioSample:

SAMN26377316

BioProject:

PRJNA812369

Submitter:

Huazhong Agriculture University

Date:

2023/01/09

Assembly level:

Chromosome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_027580225.1 (latest)

RefSeq assembly accession:

GCF_027580225.1 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JALDXJ01

Assembly method:

FALCON v. 09-2019

Expected final version:

yes

Genome coverage:

20.0x

Sequencing technology:

Illumina HiSeq; PacBio

IDs: 15255921 [UID] 39302438 [GenBank] 42094638 [RefSeq]

See Genome Information for Misgurnus anguillicaudatus

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_027580225.1	≠	GCF_027580225.1	HAU_Mang_1.0	Chromosome	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	1,104,586,043
Total ungapped length	1,104,524,743
Gaps between scaffolds	0
Number of scaffolds	358
Scaffold N50	42,952,821
Scaffold L50	11
Number of contigs	971
Contig N50	3,833,009
Contig L50	87
Total number of chromosomes and plasmids	26
Number of component sequences (WGS or clone)	358

Molecule name	GenBank sequence		RefSeq sequence	Unlocalized sequences count
Chromosome 1	CM050755.1	=	NC_073337.1	0
Chromosome 2	CM050756.1	=	NC_073338.1	0
Chromosome 3	CM050757.1	=	NC_073339.1	0
Chromosome 4	CM050758.1	=	NC_073340.1	0
Chromosome 5	CM050759.1	=	NC_073341.1	0
Chromosome 6	CM050760.1	=	NC_073342.1	0
Chromosome 7	CM050761.1	=	NC_073343.1	0
Chromosome 8	CM050762.1	=	NC_073344.1	0
Chromosome 9	CM050763.1	=	NC_073345.1	0
Chromosome 10	CM050764.1	=	NC_073346.1	0
Chromosome 11	CM050765.1	=	NC_073347.1	0
Chromosome 12	CM050766.1	=	NC_073348.1	0
Chromosome 13	CM050767.1	=	NC_073349.1	0
Chromosome 14	CM050768.1	=	NC_073350.1	0
Chromosome 15	CM050769.1	=	NC_073351.1	0
Chromosome 16	CM050770.1	=	NC_073352.1	0
Chromosome 17	CM050771.1	=	NC_073353.1	0
Chromosome 18	CM050772.1	=	NC_073354.1	0
Chromosome 19	CM050773.1	=	NC_073355.1	0
Chromosome 20	CM050774.1	=	NC_073356.1	0
Chromosome 21	CM050775.1	=	NC_073357.1	0
Chromosome 22	CM050776.1	=	NC_073358.1	0
Chromosome 23	CM050777.1	=	NC_073359.1	0
Chromosome 24	CM050778.1	=	NC_073360.1	0
Chromosome 25	CM050779.1	=	NC_073361.1	0
unplaced	n/a	n/a	n/a	332

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	1,104,569,478	357	1,104,508,178	42,952,821	613
Chromosome 1	67,006,559	1	67,003,859	67,006,559	27
Chromosome 2	60,483,320	1	60,480,120	60,483,320	32
Chromosome 3	55,890,139	1	55,887,039	55,890,139	31
Chromosome 4	53,486,214	1	53,482,814	53,486,214	34
Chromosome 5	53,185,347	1	53,183,147	53,185,347	22
Chromosome 6	50,452,351	1	50,449,651	50,452,351	27
Chromosome 7	45,106,181	1	45,104,581	45,106,181	16
Chromosome 8	44,770,150	1	44,767,550	44,770,150	26
Chromosome 9	43,410,807	1	43,406,307	43,410,807	45
Chromosome 10	43,291,699	1	43,290,399	43,291,699	13
Chromosome 11	42,952,821	1	42,950,321	42,952,821	25
Chromosome 12	41,781,969	1	41,780,469	41,781,969	15
Chromosome 13	41,277,270	1	41,275,470	41,277,270	18
Chromosome 14	40,880,434	1	40,878,234	40,880,434	22
Chromosome 15	40,361,734	1	40,359,334	40,361,734	24
Chromosome 16	39,388,450	1	39,386,750	39,388,450	17
Chromosome 17	39,290,803	1	39,289,003	39,290,803	18
Chromosome 18	38,972,984	1	38,970,984	38,972,984	20
Chromosome 19	38,639,520	1	38,637,320	38,639,520	22
Chromosome 20	36,870,195	1	36,868,195	36,870,195	20
Chromosome 21	36,705,685	1	36,703,385	36,705,685	23
Chromosome 22	34,747,650	1	34,745,850	34,747,650	18
Chromosome 23	34,590,306	1	34,588,906	34,590,306	14
Chromosome 24	33,540,985	1	33,539,985	33,540,985	10
Chromosome 25	32,702,034	1	32,699,734	32,702,034	23
unplaced	14,783,871	332	14,778,771	269,000	51

Assembly

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HAU_Mang_1.0

See Genome Information for Misgurnus anguillicaudatus

Pathogen Detection Resources

There are 2 assemblies for this organism

History (Show revision history)

Comment

Global statistics

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Assembly Unit Name
Primary Assembly
non-nuclear