Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

NHGRI_mGorGor1-v2.0_pri

Organism name:

Gorilla gorilla gorilla (western lowland gorilla)

Isolate:

KB3781

Sex:

male

BioSample:

SAMN04003007

BioProject:

PRJNA942267

Submitter:

National Human Genome Research Institute, National Institutes of Health

Date:

2024/01/08

Assembly level:

Complete Genome

Genome representation:

full

RefSeq category:

representative genome

GenBank assembly accession:

GCA_029281585.2 (latest)

RefSeq assembly accession:

GCF_029281585.2 (latest)

RefSeq assembly and GenBank assembly identical:

no (hide details)

Only in RefSeq: chromosome MT

Data displayed for RefSeq version

WGS Project:

JARGGP02

Assembly method:

Verkko v. 1.4

Expected final version:

Genome coverage:

109.0x

Sequencing technology:

PacBio Sequel; Oxford Nanopore PromethION

IDs: 20637091 [UID] 52099208 [GenBank] 53524528 [RefSeq]

See Genome Information for Gorilla gorilla

Pathogen Detection Resources

There are 12 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_029281585.2	≠	GCF_029281585.2	NHGRI_mGorGor1-v2.0_pri	Complete Genome	Latest GenBank, Latest RefSeq
GCA_029281585.1	≠	GCF_029281585.1	NHGRI_mGorGor1-v1.1-0.2.freeze_pri	Chromosome	Replaced GenBank, Replaced RefSeq

Comment

This is the goldenpath principal haplotype containing all chromosomes. The maternal (JAQQLJ000000000) and paternal (JAQQLK000000000) haplotypes are also available.

Global statistics

Number of regions with alternate loci or patches	2
Total sequence length	3,545,850,636
Total ungapped length	3,543,850,636
Total number of chromosomes and plasmids	26

Name	Location
PAR1	X:9544189-12039748
PAR1	Y:6850078-9361248

Molecule name	GenBank sequence		RefSeq sequence
Chromosome 1	CM055446.2	=	NC_073224.2
Chromosome 2	CM068950.1	=	NC_086017.1
Chromosome 3	CM055449.2	=	NC_073227.2
Chromosome 4	CM055450.2	=	NC_073228.2
Chromosome 5	CM055451.2	=	NC_073229.2
Chromosome 6	CM055452.2	=	NC_073230.2
Chromosome 7	CM055453.2	=	NC_073231.2
Chromosome 8	CM055454.2	=	NC_073232.2
Chromosome 9	CM055455.2	=	NC_073233.2
Chromosome 10	CM055456.2	=	NC_073234.2
Chromosome 11	CM055457.2	=	NC_073235.2
Chromosome 12	CM055458.2	=	NC_073236.2
Chromosome 13	CM055459.2	=	NC_073237.2
Chromosome 14	CM055460.2	=	NC_073238.2
Chromosome 15	CM055461.2	=	NC_073239.2
Chromosome 16	CM055462.2	=	NC_073240.2
Chromosome 17	CM055463.2	=	NC_073241.2
Chromosome 18	CM055464.2	=	NC_073242.2
Chromosome 19	CM055465.2	=	NC_073243.2
Chromosome 20	CM055466.2	=	NC_073244.2
Chromosome 21	CM055467.2	=	NC_073245.2
Chromosome 22	CM055468.2	=	NC_073246.2
Chromosome 23	CM068951.1	=	NC_086018.1
Chromosome X	CM055469.2	=	NC_073247.2
Chromosome Y	CM055470.2	=	NC_073248.2

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps
All	3,545,834,224	25	3,543,834,224	150,804,130	2
Chromosome 1	243,847,345	1	243,847,345	243,847,345	0
Chromosome 2	215,253,457	1	215,253,457	215,253,457	0
Chromosome 3	215,373,162	1	215,373,162	215,373,162	0
Chromosome 4	195,332,687	1	195,332,687	195,332,687	0
Chromosome 5	199,452,338	1	199,452,338	199,452,338	0
Chromosome 6	170,803,427	1	170,803,427	170,803,427	0
Chromosome 7	158,533,252	1	158,533,252	158,533,252	0
Chromosome 8	150,804,130	1	150,804,130	150,804,130	0
Chromosome 9	147,876,701	1	147,876,701	147,876,701	0
Chromosome 10	154,228,409	1	154,228,409	154,228,409	0
Chromosome 11	150,248,535	1	150,248,535	150,248,535	0
Chromosome 12	145,906,006	1	145,906,006	145,906,006	0
Chromosome 13	134,695,396	1	134,695,396	134,695,396	0
Chromosome 14	132,018,348	1	132,018,348	132,018,348	0
Chromosome 15	131,692,671	1	131,692,671	131,692,671	0
Chromosome 16	107,915,467	1	107,915,467	107,915,467	0
Chromosome 17	116,054,869	1	116,054,869	116,054,869	0
Chromosome 18	131,347,499	1	131,347,499	131,347,499	0
Chromosome 19	120,452,965	1	120,452,965	120,452,965	0
Chromosome 20	80,312,928	1	80,312,928	80,312,928	0
Chromosome 21	84,443,219	1	84,443,219	84,443,219	0
Chromosome 22	59,507,314	1	58,507,314	59,507,314	1
Chromosome 23	54,769,797	1	53,769,797	54,769,797	1
Chromosome X	177,558,554	1	177,558,554	177,558,554	0
Chromosome Y	67,405,748	1	67,405,748	67,405,748	0

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Send to:

Download Assembly

NHGRI_mGorGor1-v2.0_pri

See Genome Information for Gorilla gorilla

Pathogen Detection Resources

There are 12 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

PubMed articles for this assembly

Recent activity

Global assembly definition

Regions

Assembly statistics

Assembly Unit Name
Primary Assembly
non-nuclear