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ilAmyTran1.1

Organism name:
Amyelois transitella (moths)
Isolate:
CPQ
Sex:
female
BioSample:
SAMN27624993
BioProject:
PRJNA827935
Submitter:
USDA-ARS Ag100Pest
Date:
2023/10/04
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_032362555.1 (latest)
RefSeq assembly accession:
GCF_032362555.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
JAMBPN01
Assembly method:
HiFiASM v. 0.16.0-r369
Expected final version:
yes
Genome coverage:
82x
Sequencing technology:
PacBio Sequel
Linked assembly:
GCA_032362475.1 (alternate pseudohaplotype of diploid)

IDs: 19046241 [UID] 48539858 [GenBank] 49823628 [RefSeq]

See Genome Information for Amyelois transitella

Pathogen Detection Resources

There are 3 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length327,391,803
Total ungapped length327,391,803
Total number of chromosomes and plasmids33

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_032362625.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome 2CM063549.1=NC_083505.1
Chromosome 3CM063550.1=NC_083506.1
Chromosome 4CM063551.1=NC_083507.1
Chromosome 5CM063552.1=NC_083508.1
Chromosome 6CM063553.1=NC_083509.1
Chromosome 7CM063554.1=NC_083510.1
Chromosome 8CM063555.1=NC_083511.1
Chromosome 9CM063556.1=NC_083512.1
Chromosome 10CM063557.1=NC_083513.1
Chromosome 11CM063558.1=NC_083514.1
Chromosome 12CM063559.1=NC_083515.1
Chromosome 13CM063560.1=NC_083516.1
Chromosome 14CM063561.1=NC_083517.1
Chromosome 15CM063562.1=NC_083518.1
Chromosome 16CM063563.1=NC_083519.1
Chromosome 17CM063564.1=NC_083520.1
Chromosome 18CM063565.1=NC_083521.1
Chromosome 19CM063566.1=NC_083522.1
Chromosome 20CM063567.1=NC_083523.1
Chromosome 21CM063568.1=NC_083524.1
Chromosome 22CM063569.1=NC_083525.1
Chromosome 23CM063570.1=NC_083526.1
Chromosome 24CM063571.1=NC_083527.1
Chromosome 25CM063572.1=NC_083528.1
Chromosome 26CM063573.1=NC_083529.1
Chromosome 27CM063574.1=NC_083530.1
Chromosome 28CM063575.1=NC_083531.1
Chromosome 29CM063576.1=NC_083532.1
Chromosome 30CM063577.1=NC_083533.1
Chromosome 31CM063578.1=NC_083534.1
Chromosome ZCM063580.1=NC_083535.1
Chromosome WCM063579.1=NC_083536.1

Assembly statistics

MoleculeTotal
Length
All327,376,598
Chromosome 213,852,929
Chromosome 313,808,907
Chromosome 413,257,997
Chromosome 513,210,027
Chromosome 612,828,998
Chromosome 712,711,348
Chromosome 812,169,293
Chromosome 912,070,805
Chromosome 1012,017,879
Chromosome 1111,409,249
Chromosome 1211,369,407
Chromosome 1311,358,819
Chromosome 1411,138,648
Chromosome 1510,985,285
Chromosome 1610,889,328
Chromosome 1710,855,998
Chromosome 1810,461,456
Chromosome 1910,150,257
Chromosome 209,897,538
Chromosome 219,530,203
Chromosome 229,181,651
Chromosome 237,750,926
Chromosome 247,680,998
Chromosome 257,491,031
Chromosome 267,455,998
Chromosome 276,550,365
Chromosome 285,669,631
Chromosome 295,560,791
Chromosome 304,930,998
Chromosome 314,692,789
Chromosome Z14,039,998
Chromosome W12,397,051
MoleculeTotal
Length
Mitochondrion MT15,205