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ASM3670002v1

Organism name:
Brevibacillus borstelensis (firmicutes)
Taxonomy check:
OK
BioSample:
SAMN39610771
BioProject:
PRJNA1069099
Submitter:
Sandia National Laboratories
Date:
2024/04/05
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_036700025.1 (latest)
RefSeq assembly accession:
GCF_036700025.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
canu v. 2.2
Genome coverage:
29.98x
Sequencing technology:
PacBio Sequel

IDs: 53938038 [UID] 53938038 [GenBank] 55967058 [RefSeq]

See Genome Information for Brevibacillus borstelensis

There are 25 assemblies for this organism

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History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Name::GCF_036700025.1-RS_2024_04_05
Annotation Date::04/05/2024 15:47:55
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::5,413
CDSs (total)::5,249
Genes (coding)::5,166
CDSs (with protein)::5,166
Genes (RNA)::164
rRNAs::10, 11, 11 (5S, 16S, 23S)
complete rRNAs::10, 11, 11 (5S, 16S, 23S)
tRNAs::126
ncRNAs::6
Pseudo Genes (total)::83
CDSs (without protein)::83
Pseudo Genes (ambiguous residues)::0 of 83
Pseudo Genes (frameshifted)::32 of 83
Pseudo Genes (incomplete)::53 of 83
Pseudo Genes (internal stop)::15 of 83
Pseudo Genes (multiple problems)::15 of 83
CRISPR Arrays::2
##Genome-Annotation-Data-END##

Global statistics

Total sequence length5,602,664
Total ungapped length5,602,664
Total number of chromosomes and plasmids3

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_036700024.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP144922.1=NZ_CP144922.1
Plasmid unnamed1CP144923.1=NZ_CP144923.1
Plasmid unnamed2CP144924.1=NZ_CP144924.1

Assembly statistics

MoleculeTotal
Length
All5,602,664
Chromosome 5,570,859
Plasmid unnamed129,848
Plasmid unnamed21,957

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Brevibacillus borstelensisBrevibacillus borstelensis

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_003710865.1Brevibacillus borstelensistype

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_003710865.1Brevibacillus borstelensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.5988.9194.42
Best-match type99.5988.9194.42

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna