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PS01948

Organism name:
Bacillus sp. EU52 (firmicutes)
Taxonomy check:
OK
BioSample:
SAMN29228817
BioProject:
PRJNA768416
Submitter:
Penn State
Date:
2024/04/06
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
GenBank assembly accession:
GCA_037964975.1 (latest)
RefSeq assembly accession:
GCF_037964975.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Assembly method:
Unicycler v. 0.5.0
Genome coverage:
470.834x
Sequencing technology:
Illumina; Oxford Nanopore

IDs: 55952978 [UID] 55952978 [GenBank] 56006318 [RefSeq]

See Genome Information for Bacillus sp. EU52

History (Show revision history)

Comment

The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Name::GCF_037964975.1-RS_2024_04_05
Annotation Date::04/05/2024 22:32:36
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.7
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::4,176
CDSs (total)::4,055
Genes (coding)::3,952
CDSs (with protein)::3,952
Genes (RNA)::121
rRNAs::10, 10, 10 (5S, 16S, 23S)
complete rRNAs::10, 10, 10 (5S, 16S, 23S)
tRNAs::86
ncRNAs::5
Pseudo Genes (total)::103
CDSs (without protein)::103
Pseudo Genes (ambiguous residues)::0 of 103
Pseudo Genes (frameshifted)::64 of 103
Pseudo Genes (incomplete)::54 of 103
Pseudo Genes (internal stop)::18 of 103
Pseudo Genes (multiple problems)::25 of 103
##Genome-Annotation-Data-END##

Global statistics

Total sequence length4,059,496
Total ungapped length4,059,496
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_037964974.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome CP150177.1=NZ_CP150177.1

Assembly statistics

MoleculeTotal
Length
Chromosome 4,059,496

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Bacillus sp. EU52Bacillus sp. EU52

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_002055965.1Bacillus subtilistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type98.8096.0490.67

ANI result

Taxonomy check statusBest match statusComment
OKgenus-matchna