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50569_G01

Organism name:
Mycoplasmoides gallisepticum (bacteria)
Taxonomy check:
OK
Infraspecific name:
Culture-collection: NCTC:10115
Infraspecific name:
Serovar: not available: to be reported later
Infraspecific name:
Strain: NCTC10115
BioSample:
SAMEA4384242
BioProject:
PRJEB6403
Submitter:
SC
Date:
2018/08/19
Assembly type:
na
Assembly level:
Complete Genome
Genome representation:
full
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_900476085.1 (latest)
RefSeq assembly accession:
GCF_900476085.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
Genome coverage:
100x

IDs: 1903881 [UID] 7186368 [GenBank] 7259518 [RefSeq]

See Genome Information for Mycoplasmoides gallisepticum

There are 41 assemblies for this organism

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History (Show revision history)

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI RefSeq
Annotation Date::02/26/2024 16:39:38
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::797
CDSs (total)::756
Genes (coding)::731
CDSs (with protein)::731
Genes (RNA)::41
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::32
ncRNAs::3
Pseudo Genes (total)::25
CDSs (without protein)::25
Pseudo Genes (ambiguous residues)::0 of 25
Pseudo Genes (frameshifted)::14 of 25
Pseudo Genes (incomplete)::9 of 25
Pseudo Genes (internal stop)::8 of 25
Pseudo Genes (multiple problems)::5 of 25
CRISPR Arrays::1
##Genome-Annotation-Data-END##

Global statistics

Total sequence length981,408
Total ungapped length981,408
Total number of chromosomes and plasmids1

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_900476084.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome LS991952.1=NZ_LS991952.1

Assembly statistics

MoleculeTotal
Length
Chromosome 981,408

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Mycoplasmoides gallisepticumMycoplasmoides gallisepticum

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
GCA_000428645.1Mycoplasmoides gallisepticum ATCC 19610type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000428645.1Mycoplasmoides gallisepticumtype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared type99.9593.6699.94
Best-match type99.9593.6699.94

ANI result

Taxonomy check statusBest match statusComment
OKspecies-matchna