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mPsaObe1.curated_primary_1811

Organism name:
Psammomys obesus (fat sand rat)
BioSample:
SAMEA8556771
BioProject:
PRJEB44074
Submitter:
WELLCOME TRUST SANGER INSTITUTE
Date:
2021/06/02
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_907164565.1 (latest)
RefSeq assembly accession:
GCF_907164565.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
CAJQZG01
Genome coverage:
85x

IDs: 10230921 [UID] 27218708 [GenBank] 42288028 [RefSeq]

See Genome Information for Psammomys obesus

There are 2 assemblies for this organism

See more

History (Show revision history)

Comment

Global statistics

Total sequence length2,364,997,433
Total ungapped length2,343,669,976
Gaps between scaffolds0
Number of scaffolds11,460
Scaffold N5020,181,630
Scaffold L5034
Number of contigs61,951
Contig N5077,214
Contig L509,129
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)11,460

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,364,980,84111,4592,343,653,48320,181,63050,4900
MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
Mitochondrion MT16,592116,49316,59210