Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

ChlPCC9212_1.0

Organism name:: Chlorogloeopsis fritschii PCC 9212 (cyanobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: PCC 9212
BioSample:: SAMN02469882
BioProject:: PRJNA104963
Submitter:: Heinrich-Heine-University Duesseldorf
Date:: 2012/12/05
Assembly type:: na
Assembly level:: Contig
Genome representation:: full
GenBank assembly accession:: GCA_000317265.1 (latest)
RefSeq assembly accession:: GCF_000317265.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AJLM01
Assembly method:: GS De Novo Assembler v. 2.3
Genome coverage:: 25.0x
Sequencing technology:: 454

IDs: 616238 [UID] 503248 [GenBank] 616238 [RefSeq]

See Genome Information for Chlorogloeopsis fritschii

Pathogen Detection Resources

There are 4 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000317265.1	=	GCF_000317265.1	ChlPCC9212_1.0	Contig	Latest GenBank, Latest RefSeq

Comment

Bacteria available from: Cyanobacterial collection of strains, Institut Pasteur.
Source DNA available from: Institute of Molecular Evolution, Heinrich-Heine-University Duesseldorf, Germany.

Global statistics

Total sequence length	7,649,851
Total ungapped length	7,649,851
Number of contigs	188
Contig N50	117,952
Contig L50	19
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	188

	ANI	Query coverage	Subject coverage
Declared type	99.96	99.80	98.49
Best-match type	99.96	99.80	98.49

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Download Assembly

ChlPCC9212_1.0

See Genome Information for Chlorogloeopsis fritschii

Pathogen Detection Resources

There are 4 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

PubMed articles for this assembly

Recent activity

Global assembly definition

Assembly statistics

Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result