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ASM232722v1

Organism name:
Desulfobulbaceae bacterium UBA2213 (bacteria)
Taxonomy check:
Inconclusive
Isolate:
UBA2213
BioSample:
SAMN06452193
BioProject:
PRJNA348753
Submitter:
University of Queensland
Date:
2017/09/21
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002327225.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
DCUN01
Assembly method:
CLC de novo assembler v. 4.4.1
Expected final version:
yes
Genome coverage:
24.36x
Sequencing technology:
Illumina

IDs: 1212041 [UID] 5049028 [GenBank]

See Genome Information for Desulfobulbaceae bacterium UBA2213

History (Show revision history)

Comment

Global statistics

Total sequence length2,455,673
Total ungapped length2,449,044
Gaps between scaffolds0
Number of scaffolds214
Scaffold N5016,589
Scaffold L5045
Number of contigs327
Contig N5012,760
Contig L5058
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)214

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,455,6732142,449,04416,5891130

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Desulfobulbaceae bacterium UBA2213Desulfobulbaceae bacterium UBA2213

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_029607905.1Thiovibrio frasassiensistype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type84.530.440.38

ANI result

Taxonomy check statusBest match statusComment
Inconclusivelow-coveragena