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ASM307503v1

Organism name:
Zobellella maritima (g-proteobacteria)
Taxonomy check:
OK
Infraspecific name:
Strain: 102-Py4
BioSample:
SAMN08954523
BioProject:
PRJNA450915
Submitter:
Korea University
Date:
2018/04/30
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_003075035.1 (latest)
RefSeq assembly accession:
GCF_003075035.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
QCZE01
Assembly method:
SPAdes genome assembler v. 3.10.1
Expected final version:
no
Genome coverage:
310.7x
Sequencing technology:
Illumina

IDs: 1689891 [UID] 6429748 [GenBank] 7196668 [RefSeq]

See Genome Information for Zobellella maritima

History (Show revision history)

Comment

Global statistics

Total sequence length3,936,921
Total ungapped length3,936,701
Gaps between scaffolds0
Number of scaffolds28
Scaffold N502,563,810
Scaffold L501
Number of contigs32
Contig N50608,405
Contig L503
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)28

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,936,921283,936,7012,563,81040

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Zobellella maritimaZobellella maritima

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_039539325.1Zobellella aerophilatype

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type89.0373.2075.53

ANI result

Taxonomy check statusBest match statusComment
OKbelow-threshold-mismatchAssembly is the type-strain, mismatch is within genus and expected