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ASM370409v1

Organism name:
Pocillopora damicornis (stony corals)
Isolate:
RSMAS
BioSample:
SAMN09007954
BioProject:
PRJNA454489
Submitter:
University of Miami
Date:
2018/10/31
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_003704095.1 (latest)
RefSeq assembly accession:
GCF_003704095.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
RCHS01
Assembly method:
Dovetail HiRise Assembly v. Feb-2017
Expected final version:
yes
Genome coverage:
45.4x
Sequencing technology:
Illumina

IDs: 2041011 [UID] 7656098 [GenBank] 7878018 [RefSeq]

See Genome Information for Pocillopora damicornis

History (Show revision history)

Comment

Global statistics

Total sequence length234,350,878
Total ungapped length225,744,106
Gaps between scaffolds0
Number of scaffolds4,393
Scaffold N50326,133
Scaffold L50198
Number of contigs53,034
Contig N5025,941
Contig L502,282
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)4,393

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced234,333,4634,392225,726,691326,13348,6410
MoleculeTotal
Length
Mitochondrion MT17,415