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Genome Information for Mixophyes fleayi
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Fleay's barred frog (Mixophyes fleayi) is a large species of frog restricted to small pockets of rainforest in northern New South Wales and south-eastern Queensland, Australia (from Wikipedia entry). This sample of a male individual found in New South Wales, Australia was procured by Laura Grogan and Madelyn Mangan to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genome Lab (VGL) at the Rockefeller University, led by Erich D. Jarvis, Giulio Formenti, and Jennifer Balacco.
| Accession | PRJNA1096747 |
| Type | Umbrella project |
| Organism | Mixophyes fleayi[Taxonomy ID: 3061075] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Myobatrachoidea; Limnodynastidae; Mixophyes; Mixophyes fleayi |
| Submission | Registration date: 5-Apr-2024
Vertebrate Genomes Project |
| Relevance | Reference Genome |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 26 |
| WGS master | 2 |
| SRA Experiments | 8 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes SRA or Trace Total |
2
2
4
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA1071269 | Chromosomes | Mixophyes fleayi | Mixophyes fleayi (Fleay's barred frog) genome, aMixFle1, haplotype 1 (Vertebrate Genomes Project) | | PRJNA1071268 | Chromosomes | Mixophyes fleayi | Mixophyes fleayi (Fleay's barred frog) genome, aMixFle1, haplotype 2 (Vertebrate Genomes Project) | | PRJNA1139353 | SRA or Trace | Mixophyes fleayi (Fleay's barred frog) genome, aMixFle1, sequence data | Mixophyes fleayi (Fleay's barred frog) genome, aMixFle1, sequence data (Vertebrate Genomes Project) | | PRJNA1139354 | SRA or Trace | Mixophyes fleayi (Fleay's barred frog) transcriptome, aMixFle1 | Mixophyes fleayi (Fleay's barred frog) transcriptome, aMixFle1 (Vertebrate Genomes Project) |
|