bioreactor sludge metagenome (ID 708973) - BioProject

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Accession: PRJNA708973 ID: 708973

bioreactor sludge metagenome

Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS43 metagenome

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This project is a component of the Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States

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72 additional projects are components of the Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States.

Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States; CSTR with thin stillage fermenting microbial community

Accession	PRJNA708973
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	bioreactor sludge metagenome[Taxonomy ID: 412754] unclassified sequences; metagenomes; ecological metagenomes; bioreactor sludge metagenome
Submission	Registration date: 5-Mar-2022 DOE Joint Genome Institute
Related Resources	JGI Genome Portal GOLD
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	15
SRA Experiments	3
Other datasets
BioSample	16
Assembly	15

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

15
15

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_022483785.1	JAKVMT000000000	SAMN22412376	UW_TS_ACET1_22	Acetobacter fabarum
GCA_022483685.1	JAKVMU000000000	SAMN22412379	UW_TS_ACET2_2	Acetobacter sp.
GCA_022483665.1	JAKVMV000000000	SAMN22412397	UW_TS_ATO1_1	Atopobiaceae bacterium
GCA_022483585.1	JAKVMY000000000	SAMN22412438	UW_TS_COMLAC1_3	Companilactobacillus sp.
GCA_022483645.1	JAKVMW000000000	SAMN22412423	UW_TS_BUL1_3	Erysipelotrichaceae bacterium
GCA_022483565.1	JAKVMZ000000000	SAMN22412462	UW_TS_EUB1_3	Eubacterium sp.
GCA_022483605.1	JAKVNA000000000	SAMN22412473	UW_TS_FURLAC1_2	Furfurilactobacillus sp.
GCA_022483525.1	JAKVNC000000000	SAMN22412552	UW_TS_LCO1_2	Lachnospiraceae bacterium
GCA_022483505.1	JAKVND000000000	SAMN22412525	UW_TS_LCO2_1	Lachnospiraceae bacterium
GCA_022483485.1	JAKVNE000000000	SAMN22412542	UW_TS_LCO3_4	Lachnospiraceae bacterium
GCA_022483465.1	JAKVNF000000000	SAMN22412537	UW_TS_LCO4_1	Lachnospiraceae bacterium
GCA_022483545.1	JAKVNB000000000	SAMN22412504	UW_TS_LACCAS1_1	Lacticaseibacillus paracasei
GCA_022483435.1	JAKVNG000000000	SAMN22412570	UW_TS_PED2_1	Pediococcus pentosaceus
GCA_022483425.1	JAKVNH000000000	SAMN22412589	UW_TS_PREV1_1	Prevotella sp.
GCA_022483625.1	JAKVMX000000000	SAMN22412415	UW_TS_BUL2_2	Solobacterium sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	156
Data volume, Mbytes	40581

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bioreactor sludge metagenome

Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS43 metagenome

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