bioreactor sludge metagenome (ID 768492) - BioProject

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Accession: PRJNA768492 ID: 768492

bioreactor sludge metagenome

Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States

The goal of this study is to characterize a central set of genes relevant to medium chain fatty acid (MCFA) production to guide screens of putative MCFA-producing microorganisms from additional environments or grown on different substrates

Accession	PRJNA768492
Type	Umbrella project
Submission	Registration date: 4-Oct-2021 DOE Joint Genome Institute
Related Resources	GOLD Genome Portal
Relevance	Environmental
Locus Tag Prefix	LF046

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	653
SRA Experiments	97
Other datasets
BioSample	726
Assembly	653

SRA Data Details

Parameter	Value
Data volume, Gbases	2,079
Data volume, Tbytes	0.59

bioreactor sludge metagenome encompasses the following 73 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Contigs

BioProject accession	Assembly level	Organism	Title
PRJNA708964	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_1SRT_A metagenome (DOE Joint Genome Institute)
PRJNA708965	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_1SRT_B metagenome (DOE Joint Genome Institute)
PRJNA708966	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_024 (DOE Joint Genome Institute)
PRJNA708967	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_044 (DOE Joint Genome Institute)
PRJNA708968	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_060 (DOE Joint Genome Institute)

List all 73 'Genome sequencing' projects...

BioProject accession	Assembly level	Organism	Title
PRJNA708964	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_1SRT_A metagenome (DOE Joint Genome Institute)
PRJNA708965	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_1SRT_B metagenome (DOE Joint Genome Institute)
PRJNA708966	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_024 (DOE Joint Genome Institute)
PRJNA708967	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_044 (DOE Joint Genome Institute)
PRJNA708968	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_060 (DOE Joint Genome Institute)
PRJNA708969	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_216 (DOE Joint Genome Institute)
PRJNA708970	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_042 (DOE Joint Genome Institute)
PRJNA708971	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_098 (DOE Joint Genome Institute)
PRJNA708972	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS32 metagenome (DOE Joint Genome Institute)
PRJNA708973	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS43 metagenome (DOE Joint Genome Institute)
PRJNA768586	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_3SRT_A metagenome (DOE Joint Genome Institute)
PRJNA768587	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_3SRT_B metagenome (DOE Joint Genome Institute)
PRJNA768588	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_7SRT_A metagenome (DOE Joint Genome Institute)
PRJNA768589	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_7SRT_B metagenome (DOE Joint Genome Institute)
PRJNA768590	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_5SRT_A metagenome (DOE Joint Genome Institute)
PRJNA768591	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - DMB5_5SRT_B metagenome (DOE Joint Genome Institute)
PRJNA768592	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_000 (DOE Joint Genome Institute)
PRJNA768593	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_012 (DOE Joint Genome Institute)
PRJNA768594	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_036 (DOE Joint Genome Institute)
PRJNA768595	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_049 (DOE Joint Genome Institute)
PRJNA768596	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_054 (DOE Joint Genome Institute)
PRJNA768597	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_066 (DOE Joint Genome Institute)
PRJNA768598	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_072 (DOE Joint Genome Institute)
PRJNA768599	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_078 (DOE Joint Genome Institute)
PRJNA768600	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_084 (DOE Joint Genome Institute)
PRJNA768579	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_097 (DOE Joint Genome Institute)
PRJNA768580	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_108 (DOE Joint Genome Institute)
PRJNA768581	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_120 (DOE Joint Genome Institute)
PRJNA768582	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_126 (DOE Joint Genome Institute)
PRJNA768583	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_146 (DOE Joint Genome Institute)
PRJNA768584	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_168 (DOE Joint Genome Institute)
PRJNA768585	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_CSTR_192 (DOE Joint Genome Institute)
PRJNA768542	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_000 (DOE Joint Genome Institute)
PRJNA768543	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_015 (DOE Joint Genome Institute)
PRJNA768544	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_021 (DOE Joint Genome Institute)
PRJNA768545	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_028 (DOE Joint Genome Institute)
PRJNA768546	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_056 (DOE Joint Genome Institute)
PRJNA768547	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_063 (DOE Joint Genome Institute)
PRJNA768548	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_077 (DOE Joint Genome Institute)
PRJNA768549	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_105 (DOE Joint Genome Institute)
PRJNA768550	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_126 (DOE Joint Genome Institute)
PRJNA768551	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_148 (DOE Joint Genome Institute)
PRJNA768552	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_176 (DOE Joint Genome Institute)
PRJNA768553	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS00 metagenome (DOE Joint Genome Institute)
PRJNA768554	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS0 metagenome (DOE Joint Genome Institute)
PRJNA768555	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS2 metagenome (DOE Joint Genome Institute)
PRJNA768556	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS6 metagenome (DOE Joint Genome Institute)
PRJNA768557	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS12 metagenome (DOE Joint Genome Institute)
PRJNA768558	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS16 metagenome (DOE Joint Genome Institute)
PRJNA768559	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS20 metagenome (DOE Joint Genome Institute)
PRJNA768560	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS26 metagenome (DOE Joint Genome Institute)
PRJNA768561	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS30 metagenome (DOE Joint Genome Institute)
PRJNA768562	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS38 metagenome (DOE Joint Genome Institute)
PRJNA768563	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS49 metagenome (DOE Joint Genome Institute)
PRJNA768564	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TSR4 metagenome (DOE Joint Genome Institute)
PRJNA768565	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TSR8 metagenome (DOE Joint Genome Institute)
PRJNA768566	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TSR11 metagenome (DOE Joint Genome Institute)
PRJNA768567	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TSR13 metagenome (DOE Joint Genome Institute)
PRJNA768568	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TSR19 metagenome (DOE Joint Genome Institute)
PRJNA768569	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TSR27 metagenome (DOE Joint Genome Institute)
PRJNA768570	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TST2 metagenome (DOE Joint Genome Institute)
PRJNA768571	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TST4 metagenome (DOE Joint Genome Institute)
PRJNA768572	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TST10 metagenome (DOE Joint Genome Institute)
PRJNA768573	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TST12 metagenome (DOE Joint Genome Institute)
PRJNA768574	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TST20 metagenome (DOE Joint Genome Institute)
PRJNA768575	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TST27 metagenome (DOE Joint Genome Institute)
PRJNA768576	Contigs	bioreactor sludge metagenome	Activated sludge microbial communities from digester in WWTP, Madison, Wisconsin, United States - Acid_Sludge_Seed_A metagenome (DOE Joint Genome Institute)
PRJNA768577	Contigs	bioreactor sludge metagenome	Activated sludge microbial communities from digester in WWTP, Madison, Wisconsin, United States - Acid_Sludge_Seed_B metagenome (DOE Joint Genome Institute)
PRJNA768578	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_197 (DOE Joint Genome Institute)
PRJNA768538	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS10 metagenome (DOE Joint Genome Institute)
PRJNA768539	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TS24 metagenome (DOE Joint Genome Institute)
PRJNA768540	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TSTR6 metagenome (DOE Joint Genome Institute)
PRJNA768541	Contigs	bioreactor sludge metagenome	Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - TSTR11 metagenome (DOE Joint Genome Institute)

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bioreactor sludge metagenome

Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States

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