bioreactor sludge metagenome (ID 768578) - BioProject

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Accession: PRJNA768578 ID: 768578

bioreactor sludge metagenome

Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_197

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This project is a component of the Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States

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72 additional projects are components of the Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States.

Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States; sample from an upflow sludge blanket reactor (USB) fed ultra-filtered milk permeate, a dairy co-product high in lactose. More...

Accession	PRJNA768578
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	bioreactor sludge metagenome[Taxonomy ID: 412754] unclassified sequences; metagenomes; ecological metagenomes; bioreactor sludge metagenome
Submission	Registration date: 21-Mar-2022 DOE Joint Genome Institute
Related Resources	JGI Genome Portal GOLD
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	8
SRA Experiments	2
Other datasets
BioSample	9
Assembly	8

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

8
8

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_022647765.1	JALCLH000000000	SAMN22412315	UW_MP_PROP1_1	Acidipropionibacterium sp.
GCA_022647925.1	JALCLO000000000	SAMN22412153	UW_MP_BIF10_1	Bifidobacterium crudilactis
GCA_022647895.1	JALCLN000000000	SAMN22412164	UW_MP_BIF15_1	Bifidobacterium crudilactis
GCA_022647885.1	JALCLM000000000	SAMN22412179	UW_MP_BIF3_1	Bifidobacterium sp.
GCA_022647845.1	JALCLL000000000	SAMN22412214	UW_MP_CLOS2_1	Clostridium tyrobutyricum
GCA_022647865.1	JALCLK000000000	SAMN22412266	UW_MP_LIQLAC1_1	Liquorilactobacillus nagelii
GCA_022647805.1	JALCLJ000000000	SAMN22412276	UW_MP_MEG5_1	Megasphaera cerevisiae
GCA_022647785.1	JALCLI000000000	SAMN22412313	UW_MP_PREV7_1	Prevotella sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	159
Data volume, Mbytes	41070

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bioreactor sludge metagenome

Anaerobic fermentation bioreactor microbial communities from Madison, Wisconsin, United States - KW_USB_197

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