ID 840665 - BioProject

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Accession: PRJEB52516 ID: 840665

EMG produced TPA metagenomics assembly of PRJNA312048 data set (gut microbe Metagenome).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA312048, and was assembled with metaSPAdes v3. More...

Accession	PRJEB52516
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 20-May-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3583
WGS master	104
Publications
PubMed	1
PMC	1
Other datasets
BioSample	104
Assembly	104

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

104
104

Assembly	WGS	BioSample	Taxonomy
GCA_945787905.1	CALZJP000000000	SAMEA110341208	Actinobacillus porcinus
GCA_945788175.1	CALZKT000000000	SAMEA110341206	Actinobacillus porcitonsillarum
GCA_945787825.1	CALZJW000000000	SAMEA110341205	Clostridium celatum
GCA_945788245.1	CALZLG000000000	SAMEA110341215	Clostridium disporicum
GCA_945788105.1	CALZKY000000000	SAMEA110341240	Dechloromonas aromatica
GCA_945787755.1	CALZIX000000000	SAMEA110341251	Escherichia coli
GCA_945788565.1	CALZML000000000	SAMEA110341297	Faecalibacterium prausnitzii
GCA_945788395.1	CALZLS000000000	SAMEA110341228	Fusobacterium mortiferum
GCA_945787835.1	CALZJT000000000	SAMEA110341257	Lactobacillus johnsonii
GCA_945788005.1	CALZKJ000000000	SAMEA110341269	Megasphaera elsdenii
GCA_945787745.1	CALZII000000000	SAMEA110341212	Plesiomonas shigelloides
GCA_945788615.1	CALZMO000000000	SAMEA110341211	Romboutsia timonensis
GCA_945788135.1	CALZKN000000000	SAMEA110341302	Subdoligranulum variabile
GCA_945787535.1	CALZHU000000000	SAMEA110341230	Turicibacter sanguinis
GCA_945788085.1	CALZKO000000000	SAMEA110341210	[Actinobacillus] rossii
GCA_945787065.1	CALZGE000000000	SAMEA110341214	[Pasteurella] aerogenes
GCA_945787505.1	CALZHC000000000	SAMEA110341234	uncultured Alistipes sp.
GCA_945787925.1	CALZJY000000000	SAMEA110341207	uncultured Anaerosporobacter sp.
GCA_945787885.1	CALZJF000000000	SAMEA110341290	uncultured Bacteroidales bacterium
GCA_945788665.1	CALZMW000000000	SAMEA110341253	uncultured Bacteroidales bacterium
GCA_945788445.1	CALZMA000000000	SAMEA110341273	uncultured Bacteroidales bacterium
GCA_945787425.1	CALZHO000000000	SAMEA110341278	uncultured Bacteroidales bacterium
GCA_945787405.1	CALZHE000000000	SAMEA110341216	uncultured Bacteroidales bacterium
GCA_945788465.1	CALZME000000000	SAMEA110341288	uncultured Bacteroidales bacterium
GCA_945788415.1	CALZLU000000000	SAMEA110341220	uncultured Bacteroidales bacterium
GCA_945788345.1	CALZLP000000000	SAMEA110341274	uncultured Bacteroidales bacterium
GCA_945787195.1	CALZGW000000000	SAMEA110341270	uncultured Bacteroidales bacterium
GCA_945788125.1	CALZKV000000000	SAMEA110341286	uncultured Bacteroidales bacterium
GCA_945788215.1	CALZLC000000000	SAMEA110341221	uncultured Bacteroidales bacterium
GCA_945788405.1	CALZLY000000000	SAMEA110341223	uncultured Bacteroidales bacterium
GCA_945787025.1	CALZGA000000000	SAMEA110341218	uncultured Bacteroidales bacterium
GCA_945788295.1	CALZLN000000000	SAMEA110341225	uncultured Bacteroidales bacterium
GCA_945788525.1	CALZMH000000000	SAMEA110341298	uncultured Bacteroidales bacterium
GCA_945787875.1	CALZJU000000000	SAMEA110341232	uncultured Bacteroides sp.
GCA_945788425.1	CALZLX000000000	SAMEA110341231	uncultured Bacteroides sp.
GCA_945788185.1	CALZLA000000000	SAMEA110341305	uncultured Bacteroides sp.
GCA_945788605.1	CALZMP000000000	SAMEA110341295	uncultured Bacteroides sp.
GCA_945787915.1	CALZJR000000000	SAMEA110341256	uncultured Clostridia bacterium
GCA_945788645.1	CALZMU000000000	SAMEA110341250	uncultured Clostridia bacterium
GCA_945787695.1	CALZIV000000000	SAMEA110341281	uncultured Clostridia bacterium
GCA_945787965.1	CALZKE000000000	SAMEA110341241	uncultured Clostridia bacterium
GCA_945787215.1	CALZGO000000000	SAMEA110341217	uncultured Clostridia bacterium
GCA_945788495.1	CALZMF000000000	SAMEA110341276	uncultured Clostridia bacterium
GCA_945788635.1	CALZMT000000000	SAMEA110341275	uncultured Clostridia bacterium
GCA_945787975.1	CALZKH000000000	SAMEA110341262	uncultured Clostridia bacterium
GCA_945787805.1	CALZID000000000	SAMEA110341304	uncultured Clostridia bacterium
GCA_945788305.1	CALZLJ000000000	SAMEA110341280	uncultured Clostridia bacterium
GCA_945788435.1	CALZMD000000000	SAMEA110341265	uncultured Clostridia bacterium
GCA_945787395.1	CALZHA000000000	SAMEA110341246	uncultured Clostridia bacterium
GCA_945788655.1	CALZMV000000000	SAMEA110341258	uncultured Clostridia bacterium
GCA_945788455.1	CALZMC000000000	SAMEA110341279	uncultured Clostridia bacterium
GCA_945788225.1	CALZLD000000000	SAMEA110341300	uncultured Clostridia bacterium
GCA_945788165.1	CALZKR000000000	SAMEA110341203	uncultured Clostridium sp.
GCA_945788145.1	CALZLB000000000	SAMEA110341204	uncultured Clostridium sp.
GCA_945788235.1	CALZLF000000000	SAMEA110341213	uncultured Clostridium sp.
GCA_945788325.1	CALZLL000000000	SAMEA110341238	uncultured Clostridium sp.
GCA_945787985.1	CALZKG000000000	SAMEA110341248	uncultured Erysipelotrichaceae bacterium
GCA_945787455.1	CALZHF000000000	SAMEA110341263	uncultured Erysipelotrichaceae bacterium
GCA_945787275.1	CALZGK000000000	SAMEA110341236	uncultured Erysipelotrichaceae bacterium
GCA_945788055.1	CALZKQ000000000	SAMEA110341301	uncultured Erysipelotrichaceae bacterium
GCA_945787855.1	CALZJM000000000	SAMEA110341306	uncultured Fusobacterium sp.
GCA_945788255.1	CALZLK000000000	SAMEA110341209	uncultured Fusobacterium sp.
GCA_945788065.1	CALZKS000000000	SAMEA110341296	uncultured Lachnobacterium sp.
GCA_945786935.1	CALZFY000000000	SAMEA110341224	uncultured Lachnoclostridium sp.
GCA_945788595.1	CALZMS000000000	SAMEA110341242	uncultured Lachnospiraceae bacterium
GCA_945788375.1	CALZLV000000000	SAMEA110341235	uncultured Lachnospiraceae bacterium
GCA_945787565.1	CALZIE000000000	SAMEA110341233	uncultured Lachnospiraceae bacterium
GCA_945788335.1	CALZLM000000000	SAMEA110341264	uncultured Lachnospiraceae bacterium
GCA_945787485.1	CALZHV000000000	SAMEA110341260	uncultured Lachnospiraceae bacterium
GCA_945787995.1	CALZKI000000000	SAMEA110341259	uncultured Lachnospiraceae bacterium
GCA_945787815.1	CALZJO000000000	SAMEA110341249	uncultured Lachnospiraceae bacterium
GCA_945788475.1	CALZLZ000000000	SAMEA110341261	uncultured Lactobacillus sp.
GCA_945788535.1	CALZMJ000000000	SAMEA110341277	uncultured Mediterranea sp.
GCA_945788025.1	CALZKL000000000	SAMEA110341284	uncultured Megamonas sp.
GCA_945788285.1	CALZLH000000000	SAMEA110341299	uncultured Oribacterium sp.
GCA_945787935.1	CALZKC000000000	SAMEA110341244	uncultured Peptococcaceae bacterium
GCA_945788505.1	CALZMG000000000	SAMEA110341267	uncultured Prevotella sp.
GCA_945788545.1	CALZMK000000000	SAMEA110341227	uncultured Prevotella sp.
GCA_945788315.1	CALZLT000000000	SAMEA110341303	uncultured Prevotella sp.
GCA_945787415.1	CALZHM000000000	SAMEA110341239	uncultured Prevotella sp.
GCA_945787895.1	CALZJQ000000000	SAMEA110341292	uncultured Prevotella sp.
GCA_945788585.1	CALZMM000000000	SAMEA110341289	uncultured Prevotella sp.
GCA_945787235.1	CALZGT000000000	SAMEA110341222	uncultured Prevotellaceae bacterium
GCA_945787675.1	CALZIY000000000	SAMEA110341271	uncultured Prevotellaceae bacterium
GCA_945787625.1	CALZJL000000000	SAMEA110341229	uncultured Prevotellaceae bacterium
GCA_945788035.1	CALZKM000000000	SAMEA110341294	uncultured Prevotellaceae bacterium
GCA_945788385.1	CALZLQ000000000	SAMEA110341266	uncultured Prevotellaceae bacterium
GCA_945788095.1	CALZKW000000000	SAMEA110341268	uncultured Prevotellaceae bacterium
GCA_945787015.1	CALZGM000000000	SAMEA110341219	uncultured Roseburia sp.
GCA_945787685.1	CALZJB000000000	SAMEA110341291	uncultured Ruminococcus sp.
GCA_945788365.1	CALZLR000000000	SAMEA110341254	uncultured Selenomonadaceae bacterium
GCA_945787945.1	CALZKD000000000	SAMEA110341245	uncultured Solobacterium sp.
GCA_945787645.1	CALZIA000000000	SAMEA110341252	uncultured Streptococcus sp.
GCA_945788045.1	CALZKP000000000	SAMEA110341293	uncultured Treponema sp.
GCA_945788015.1	CALZKK000000000	SAMEA110341285	uncultured Treponema sp.
GCA_945788275.1	CALZLO000000000	SAMEA110341283	uncultured Treponema sp.
GCA_945788195.1	CALZKU000000000	SAMEA110341282	uncultured Treponema sp.
GCA_945788485.1	CALZMB000000000	SAMEA110341255	uncultured bacterium
GCA_945787725.1	CALZIU000000000	SAMEA110341243	uncultured bacterium
GCA_945788265.1	CALZLI000000000	SAMEA110341237	uncultured bacterium
GCA_945787665.1	CALZJA000000000	SAMEA110341287	uncultured bacterium
GCA_945787765.1	CALZIW000000000	SAMEA110341247	uncultured bacterium
GCA_945788075.1	CALZKZ000000000	SAMEA110341226	uncultured bacterium
GCA_945787375.1	CALZHN000000000	SAMEA110341272	uncultured bacterium

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EMG produced TPA metagenomics assembly of PRJNA312048 data set (gut microbe Metagenome).

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