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Genome Information for Neoarius graeffei
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The blue salmon catfish (Neoarius graeffei) is a species of catfish found in freshwater rivers of Australia and Papua New Guinea. This species is most identifiable by its large, shark-like dorsal fin that is led by a poisonous spine. (from Wikipedia entry). This sample was procured by Aaron Davis and used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). The project was coordinated by Ricardo Betancur of the University of Oklahoma. Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.
| Accession | PRJNA922166 |
| Type | Umbrella project |
| Organism | Neoarius graeffei[Taxonomy ID: 443677] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ariidae; Neoarius; Neoarius graeffei |
| Submission | Registration date: 9-Jan-2023
Vertebrate Genomes Project |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 53419 |
| WGS master | 2 |
| Transcript | 53323 |
| Protein Sequences | 46639 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds Total |
2
1
3
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA839496 | Chromosomes | Neoarius graeffei | Neoarius graeffei (blue salmon catfish) genome, fNeoGra1, primary haplotype (Vertebrate Genomes Project) | | PRJNA839495 | Scaffolds | Neoarius graeffei | Neoarius graeffei (blue salmon catfish) genome, fNeoGra1, alternate haplotype (Vertebrate Genomes Project) | | PRJNA1037146 | Chromosomes | Neoarius graeffei | Neoarius graeffei isolate:fNeoGra1 RefSeq Genome sequencing and assembly (NCBI) |
|