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Items: 17

1.

Metagenomic characterisation of the caecal microbiota of XCR1 wild-type and knockout chickens, with and without infectious bronchitis virus vaccination

Project data type: Genome sequencing
Scope:
Monoisolate
the roslin institute (university of edinburgh)
Accession:
PRJEB64517
ID:
1110482
2.
3.

Mouse Gastrointestinal Bacteria Catalogue - MAGs

Additional genomes (MAGs) of the Mouse Gastrointestinal Bacteria Catalogue

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
UNIVERSITY OF CAMBRIDGE
Accession:
PRJEB59335
ID:
931538
4.

MicroReset rabbit

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Institut National pour la Recherche Agronomique (FRANCE)
Accession:
PRJEB50625
ID:
912969
5.

Primary metagenome assemblies and Metagenome-Assembled Genomes of the MetaChick project

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Institut National pour la Recherche Agronomique (FRANCE)
Accession:
PRJEB53581
ID:
850761
6.

Ultra-deep Sequencing of Hadza Hunter-Gatherers Recovers Vanishing Microbes

Extensive microbial novelty in the Hadza and Nepali gut microbiome reveals how lifestyle impacts composition and function

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
stanford university school of medicine
Accession:
PRJEB49206
ID:
840256
7.

EMG produced TPA metagenomics assembly of PRJEB33338 data set (Metagenomics of chicken cecal contents from fast and slower growing birds).

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
EMG
Accession:
PRJEB50262
ID:
798957
8.

Mouse Gastrointestinal Bacteria Catalogue - MAGs

Representative genomes (MAGs) of the Mouse Gastrointestinal Bacteria Catalogue

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
UNIVERSITY OF CAMBRIDGE
Accession:
PRJEB45234
ID:
739353
9.

Uncultured novel prokaryotic genomes associated with metabolic diseases such as T2D and T2D-related comorbidities

Recovery of novel prokaryotic genomes associated with metabolic diseases such as T2D and T2D-related comorbidities

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
EMG
Accession:
PRJEB37358
ID:
693746
10.

The Unified Human Gastrointestinal Genome catalogue

A unified sequence catalogue of the human gut microbiome

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
EMG
Accession:
PRJEB33885
ID:
559126
11.

Metagenomics of chicken cecal contents

Metagenomics of chicken cecal contents from fast and slower growing birds

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
THE ROSLIN INSTITUTE
Accession:
PRJEB33338
ID:
554289
12.

An integrated metagenome catalog reveals new insights into the murine gut microbiome

The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs)  linked to reconstructed full-length 16S rRNA gene sequences

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
HELMHOLTZ CENTRE FOR INFECTION RESEARCH
Accession:
PRJEB32890
ID:
548304
13.

Study on the diversity of gut microorganisms in mice infected with different toxic H7N9 viruses

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
National Key Laboratory of Agricultural Microbiology
Accession:
PRJEB31298
ID:
546180
14.

Caloric restricted mice

Microbiota of caloric restricted mice by WMGS

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
HUG
Accession:
PRJEB20796
ID:
514494
15.

mice obesity

High fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Beijing Genome Institute
Accession:
PRJEB10308
ID:
354925
16.

mouse gut metagenome

mouse gut metagenome Metagenome

Project data type: Genome sequencing and assembly
Scope:
Multispecies
Insytitute of microbiology and epidemiology
Accession:
PRJNA341282
ID:
341282
17.

Refseq Prokaryotic Genome Annotation Project

Project data type: RefSeq Other
Scope:
Multispecies
NCBI
Accession:
PRJNA224116
ID:
224116

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