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Genome Information for Syngnathus scovelli
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Genome Information for Syngnathus typhle
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Genome Information for Nerophis ophidion
The evolution of novel traits can change the way that organisms interact with their environments to survive, grow and reproduce.
More...The evolution of novel traits can change the way that organisms interact with their environments to survive, grow and reproduce. Deep knowledge of the underlying genes and developmental changes that underly most evolutionary innovations is sparse, as is the understanding of the ecological consequences for both the organisms in which novel traits emerged and the organisms with which they interact in communities. A particular gap in understanding is how the evolution of novel traits influences the biodiversity of their associated microbial communities. This project will help fill this gap in our knowledge by studying a remarkable innovation of male pregnancy in seahorses, pipefish, and seadragons. This project will include the creation of new genome sequences and detailed studies of the developmental genetic underpinnings of the embryo brooding structures that make male pregnancy possible. The consequences of pouch evolution on the complexity and function of the microbial communities in the pouch will also be studied, as well as how this unique host-associated microbiota can affect the fitness of embryos in the pouch.
Less...| Accession | PRJNA851781 |
| Data Type | Genome sequencing and assembly |
| Scope | Multispecies |
| Publications | - Ramesh B et al., "Improvements to the Gulf pipefish Syngnathus scovelli genome.", GigaByte, 2023;2023:gigabyte76
- Song HY et al., "Mitogenomic circumscription of a novel percomorph fish clade mainly comprising "Syngnathoidei" (Teleostei).", Gene, 2014 Jun 1;542(2):146-55
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| Grants | - "Collaborative Research: RoL: The evo-devo of male pregnancy and its effects on the brood pouch microbiome - University of Oregon" (Grant ID 2015301, National Science Foundation)
- "Collaborative Research: RoL: The evo-devo of male pregnancy and its effects on the brood pouch microbiome - University of Idaho" (Grant ID 2015419, National Science Foundation)
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| Submission | Registration date: 12-Jul-2022
University of Idaho at Moscow |
| Relevance | Evolution |
| Locus Tag Prefix | NG935 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 244 |
| WGS master | 12 |
| SRA Experiments | 71 |
| Publications |
| PubMed | 2 |
| PMC | 1 |
| Other datasets |
| BioSample | 84 |
| Assembly | 12 |
Related Project Category: RefseqGenbank