marine metagenome (ID 390581) - BioProject

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Accession: PRJNA390581 ID: 390581

marine metagenome

marine metagenome Genome sequencing and assembly

Extraction of novel alphaproteobacterial genomes from marine metagenomes to re-evaluate the phylogenetic origin of mitochondria.

Accession	PRJNA390581
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Grants	"ERC Starting Grant" (Grant ID 310039-PUZZLE_CELL, European research council)
Submission	Registration date: 22-Feb-2018 Uppsala University
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	7380
WGS master	45
Protein Sequences	71897
Other datasets
BioSample	45
Assembly	45

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

45
45

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_002937575.1	PTKC00000000	SAMN07286230	MarineAlpha10_Bin1	Alphaproteobacteria bacterium MarineAlpha10_Bin1
GCA_002937555.1	PTKB00000000	SAMN07286231	MarineAlpha10_Bin2	Alphaproteobacteria bacterium MarineAlpha10_Bin2
GCA_002937525.1	PTKA00000000	SAMN07286232	MarineAlpha10_Bin3	Alphaproteobacteria bacterium MarineAlpha10_Bin3
GCA_002937455.1	PTJZ00000000	SAMN07286233	MarineAlpha11_Bin1	Alphaproteobacteria bacterium MarineAlpha11_Bin1
GCA_002937505.1	PTJY00000000	SAMN07286234	MarineAlpha12_Bin1	Alphaproteobacteria bacterium MarineAlpha12_Bin1
GCA_002938335.1	PTLO00000000	SAMN07286192	MarineAlpha1_Bin1	Alphaproteobacteria bacterium MarineAlpha1_Bin1
GCA_002938125.1	PTLN00000000	SAMN07286193	MarineAlpha2_Bin1	Alphaproteobacteria bacterium MarineAlpha2_Bin1
GCA_002938085.1	PTLM00000000	SAMN07286194	MarineAlpha3_Bin1	Alphaproteobacteria bacterium MarineAlpha3_Bin1
GCA_002938315.1	PTLL00000000	SAMN07286195	MarineAlpha3_Bin2	Alphaproteobacteria bacterium MarineAlpha3_Bin2
GCA_002938075.1	PTLK00000000	SAMN07286196	MarineAlpha3_Bin3	Alphaproteobacteria bacterium MarineAlpha3_Bin3
GCA_002938045.1	PTLJ00000000	SAMN07286197	MarineAlpha3_Bin4	Alphaproteobacteria bacterium MarineAlpha3_Bin4
GCA_002938285.1	PTLI00000000	SAMN07286198	MarineAlpha3_Bin5	Alphaproteobacteria bacterium MarineAlpha3_Bin5
GCA_002938035.1	PTLH00000000	SAMN07286199	MarineAlpha3_Bin6	Alphaproteobacteria bacterium MarineAlpha3_Bin6
GCA_002937995.1	PTLG00000000	SAMN07286200	MarineAlpha3_Bin7	Alphaproteobacteria bacterium MarineAlpha3_Bin7
GCA_002938275.1	PTLF00000000	SAMN07286201	MarineAlpha4_Bin1	Alphaproteobacteria bacterium MarineAlpha4_Bin1
GCA_002938015.1	PTLE00000000	SAMN07286202	MarineAlpha4_Bin2	Alphaproteobacteria bacterium MarineAlpha4_Bin2
GCA_002937975.1	PTLD00000000	SAMN07286203	MarineAlpha5_Bin1	Alphaproteobacteria bacterium MarineAlpha5_Bin1
GCA_002938175.1	PTKU00000000	SAMN07286212	MarineAlpha5_Bin10	Alphaproteobacteria bacterium MarineAlpha5_Bin10
GCA_002937875.1	PTKT00000000	SAMN07286213	MarineAlpha5_Bin11	Alphaproteobacteria bacterium MarineAlpha5_Bin11
GCA_002937855.1	PTKS00000000	SAMN07286214	MarineAlpha5_Bin12	Alphaproteobacteria bacterium MarineAlpha5_Bin12
GCA_002937955.1	PTLC00000000	SAMN07286204	MarineAlpha5_Bin2	Alphaproteobacteria bacterium MarineAlpha5_Bin2
GCA_002938255.1	PTLB00000000	SAMN07286205	MarineAlpha5_Bin3	Alphaproteobacteria bacterium MarineAlpha5_Bin3
GCA_002938235.1	PTLA00000000	SAMN07286206	MarineAlpha5_Bin4	Alphaproteobacteria bacterium MarineAlpha5_Bin4
GCA_002938205.1	PTKZ00000000	SAMN07286207	MarineAlpha5_Bin5	Alphaproteobacteria bacterium MarineAlpha5_Bin5
GCA_002937925.1	PTKY00000000	SAMN07286208	MarineAlpha5_Bin6	Alphaproteobacteria bacterium MarineAlpha5_Bin6
GCA_002938195.1	PTKX00000000	SAMN07286209	MarineAlpha5_Bin7	Alphaproteobacteria bacterium MarineAlpha5_Bin7
GCA_002937915.1	PTKW00000000	SAMN07286210	MarineAlpha5_Bin8	Alphaproteobacteria bacterium MarineAlpha5_Bin8
GCA_002937895.1	PTKV00000000	SAMN07286211	MarineAlpha5_Bin9	Alphaproteobacteria bacterium MarineAlpha5_Bin9
GCA_002937825.1	PTKR00000000	SAMN07286215	MarineAlpha6_Bin1	Alphaproteobacteria bacterium MarineAlpha6_Bin1
GCA_002937815.1	PTKQ00000000	SAMN07286216	MarineAlpha6_Bin2	Alphaproteobacteria bacterium MarineAlpha6_Bin2
GCA_002937795.1	PTKP00000000	SAMN07286217	MarineAlpha6_Bin3	Alphaproteobacteria bacterium MarineAlpha6_Bin3
GCA_002937775.1	PTKO00000000	SAMN07286218	MarineAlpha6_Bin4	Alphaproteobacteria bacterium MarineAlpha6_Bin4
GCA_002938155.1	PTKN00000000	SAMN07286219	MarineAlpha6_Bin5	Alphaproteobacteria bacterium MarineAlpha6_Bin5
GCA_002937755.1	PTKM00000000	SAMN07286220	MarineAlpha6_Bin6	Alphaproteobacteria bacterium MarineAlpha6_Bin6
GCA_002937705.1	PTKL00000000	SAMN07286221	MarineAlpha7_Bin1	Alphaproteobacteria bacterium MarineAlpha7_Bin1
GCA_002937725.1	PTKK00000000	SAMN07286222	MarineAlpha8_Bin1	Alphaproteobacteria bacterium MarineAlpha8_Bin1
GCA_002937675.1	PTKJ00000000	SAMN07286223	MarineAlpha9_Bin1	Alphaproteobacteria bacterium MarineAlpha9_Bin1
GCA_002937695.1	PTKI00000000	SAMN07286224	MarineAlpha9_Bin2	Alphaproteobacteria bacterium MarineAlpha9_Bin2
GCA_002937655.1	PTKH00000000	SAMN07286225	MarineAlpha9_Bin3	Alphaproteobacteria bacterium MarineAlpha9_Bin3
GCA_002937625.1	PTKG00000000	SAMN07286226	MarineAlpha9_Bin4	Alphaproteobacteria bacterium MarineAlpha9_Bin4
GCA_002937595.1	PTKF00000000	SAMN07286227	MarineAlpha9_Bin5	Alphaproteobacteria bacterium MarineAlpha9_Bin5
GCA_002937585.1	PTKE00000000	SAMN07286228	MarineAlpha9_Bin6	Alphaproteobacteria bacterium MarineAlpha9_Bin6
GCA_002938115.1	PTKD00000000	SAMN07286229	MarineAlpha9_Bin7	Alphaproteobacteria bacterium MarineAlpha9_Bin7
GCA_002937495.1	PTJW00000000	SAMN07286236	MarineProteo1_Bin2	Pseudomonadota bacterium
GCA_002937465.1	PTJX00000000	SAMN07286235	MarineProteo1_Bin1	Pseudomonadota bacterium

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marine metagenome

marine metagenome Genome sequencing and assembly

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