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Organizing biological data
Thermus thermophilus
HB27-WT-RNAseq
I-B crRNA sequencing
Assembled high-quility MAGs from 3321 global soil metagenomic samples
Thermus thermophilus strain:ET-1
Thermus thermophilus strain:ET-1 Genome sequencing
Thermus thermophilus HB8
Thermus thermophilus HB8 Raw sequence reads
Whole-genome sequencing of novel Thermus thermophilus strains isolated from Shirahama Hot Spring.
Transcriptional analysis of host and phage genes during phage infection
Interference Requirements of Type III CRISPR-Cas Systems from Thermus thermophilus
Thermus thermophilus Raw sequence reads
Chromatin immunoprecipitation DNA-sequencing (ChIP-seq) for RNA-polymerases encoded by P23-45 bacteriophage
ONT-cappable-seq for P23-45 bacteriophage 5 min post-infection
mutantTth202204
Combination of clean mutations in the Primpol gene and catalytic Primpol mutants with clean deletions of the addAB operon
DNA repair pathways are important in the biology of the bacterium Thermus thermophilus.
The main objective is testing how important the RecFOR pathway genes RecO and RecR are in Thermus thermophilus biology, toghether with the downstream resolvase RuvB, whose product is part of the RuvABC complex.
Verify the transposition events in genomic DNA from 10 different strains of Thermus thermophilus.
Genomic DNA from 10 different strains of Thermus thermophilus were selected on kanamycin after transformation of a Thermus thermophilus Primpol gene deletion mutant with Thermus thermophilus genomic DNA that has been subject to a transposition reaction with a Tn5 transposase and a transposable fragment that contains a kanamycin resistance cassette in order to verify the transposition events.
Whole genome sequencing of five Thermus thermophilus HB27 strains used to study the physiological role of Ttago and TthPrimpol in DNA interference.
This project aims to sequence, in a whole-genome scale, five derivates of the thermophilic bacteria Thermus thermophilus HB27 in order to detect SNPs and compare the differences between mutants and its parental strains, quantify plasmid copy number of each strain and study the coverage of lectures along the genome.
Large-scale analysis of novel cellular microbes from the marine biome
Thermus thermophilus strain:N-1
Thermus thermophilus strain:N-1 Genome sequencing
Thermus thermophilus strain:TMY
Complete genome sequence of Thermus thermophilus TMY (JCM 10668)
Whole-genome sequencing of novel Thermus thermophilus strains isolated from Mine Onsen hot spring.
Genomic profile between two different strains of Thermus Thermophilus (cell-to-cell conjugation).
Check the genomic profile of colonies grown from an horizontal gene transfer event through a cell-to-cell conjugation between two different strains of Thermus Thermophilus.
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