U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CK12h_2 from Glycine soja N24852

Identifiers
BioSample: SAMN06052506; Sample name: CK12h_2_clean_data; SRA: SRS1817998
Organism
Glycine soja
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Package
Plant; version 1.0
Attributes
cultivarN24852
development stageV3
geographic locationSouth Korea
tissueRoot
biomaterial providerNanjing Agricultural University, China
treatmentNaHCO3
Description

Root is the primary tissue in soil encountering alkaline stress, therefore in this research, we investigated the transcriptome profiles in the roots of an alkalinity-tolerant wild soybean variety, N24852, using quartz sand culture medium subjected to higher concentration of NaHCO3 (90 mM), which is more similar to the alkalinity in the field. The aim of this study was to find differentially expressed genes, metabolic pathways, and overall transcriptional regulation of soybean response to early stage of NaHCO3 stress, which would broaden our understanding of the molecular and regulatory mechanisms of plant response to alkaline stress, and to identify candidate genes that could be utilized to improve soybean tolerance to alkalinity in future breeding programs.

BioProject
PRJNA354842 Glycine soja cultivar:N24852
Retrieve all samples from this project

Submission
Nanjing Agricultural University, Li Yan; 2016-11-24
Accession:
SAMN06052506
ID:
6052506

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center