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Virulence gene profiles and phylogeny of Shiga toxin-positive Escherichia coli strains isolated from FDA regulated foods during 2010-2017

Identifiers: BioSample: SAMN10359132; Sample name: 300829-16A; SRA: SRS4005652

Organism: Escherichia coli
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia

Package: Pathogen: environmental/food/other; version 1.0

Attributes

collected by	FDA
isolation source	leafy green
source type	food
Interagency Food Safety Analytics Collaboration (IFSAC) category	vegetable row crops (leafy)
collection date	2012
geographic location	USA
latitude and longitude	missing
strain	CFSAN053347
isolate	300829-16A
ontological term	leafy vegetable:FOODON_03411566
attribute_package	environmental/food/other

BioProject: PRJNA312475 Escherichia coli
Retrieve all samples from this project

Submission: FDA/CFSAN, Narjol Gonzalez-Escalona; 2018-11-01

Accession:: SAMN10359132
ID:: 10359132

BioProject SRA Nucleotide

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Virulence gene profiles and phylogeny of Shiga toxin-positive Escherichia coli s...
Virulence gene profiles and phylogeny of Shiga toxin-positive Escherichia coli strains isolated from FDA regulated foods during 2010-2017

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Pathogen: environmental/food/other sample from Escherichia coli
Pathogen: environmental/food/other sample from Escherichia coli

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