Conserved Protein Domain Family
MFS_MFSD2B

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cd17452: MFS_MFSD2B 
Major facilitator superfamily domain-containing protein 2B
Major facilitator superfamily domain-containing protein 2B (MFSD2B) is closely related to MFSD2A, and their conserved genomic structure suggests that they are derived from the duplication of an ancestral gene. Variations of chromosome 2 gene expressions among patients with lung cancer or non-cancer identified MFSD2B as a potential risk or protect factor in the prognosis of lung adenocarcinoma. MFSD2B belongs to the Salmonella enterica Na+/melibiose symporter like (MelB-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 341010
Aligned: 5 rows
Threshold Bit Score: 708.893
Created: 16-Mar-2017
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ##  ##  #                                #                            
A6NFX1        44 KVCYGIGGVPNQIASSATAFYLQLFLLDiaqiPAAQVSLVLFGGKVSGAAADPVAGFFINRSqrtgsGRLMPWVLGCTPF 123 human
XP_007895292  22 KLCFAIGGAPYEVVGSAIGFFLQIYLLDvaqiTPFHASLVVFVGRAWDAATEPAVGYFISRSkwtkiGRLMPWMIGSTPF 101 elephant shark
A4IH46        38 KVCYAIGGAPNQVSGSASAFFLQIYLLDvaliSPYQASLVLSLGKTWGGITDPIVGYCISKSkwtriGRLMPWMLGCTPF 117 tropical clawed...
XP_426214     80 KLCYAIGGIPNQVAGSAASFSLQIYLLDiariTPFHASLVLFIGKASGAVSDPVAGFFISKSrwrkiGRLMPWMLACTPF 159 chicken
XP_695343     64 KLCFAIGGAPNQVAGSATAFFLQIYLLDiaqiNPFQASMVLFVGKAWGAVTDPIVGFFITKSkwtkiGRLMPWMVGCTPF 143 zebrafish
Feature 1                                        ## ###  #                    #  ##  #           
A6NFX1       124 IALAYFFLWFLPpftslrglWYTTFYCLFQALATFFQVPYTALTMlltpcprerdsataYRMTVEMAGTLMGATVHGLIV 203 human
XP_007895292 102 AVLSYLLLWYVPplktwkflWYLVFYCLFQTLLTCFHVPYSALTMfistdqserdsataYRTTVEVFGTMTGAAVQGQIV 181 elephant shark
A4IH46       118 LVVSYFLLWFVPtfetgrvlWYLAFFSCFQALSTAYHVPYTTLTMflstdqmerdsataYRMTVEVLGTLIGAAVQGQIV 197 tropical clawed...
XP_426214    160 IVVSYFFMWYLPpfvtgrvvWYLIFYCIFQALTTLFQVPYSALTMflstdqkerdsataYRMTMEVLGTLVGAALQGRIV 239 chicken
XP_695343    144 MVVSYFYLWFVPpftngrfmWYLGFYCLYQTLITCFHVPYSALTMflstdqrerdsataYRMTVEVLGTLVGAAIQGQIV 223 zebrafish
Feature 1                                                                                        
A6NFX1       204 SGAhrphrceatatp---------------------gpvtvspnaahlYCIAAAVVVVTYPVCISLLCLGVKErpdpsap 262 human
XP_007895292 182 AHGhasnhcflrntssdssvnftdvtsalygntstsqpqdllsqskdsYMIAAGVIGGLYILCTIVLFFGVKErddpytv 261 elephant shark
A4IH46       198 ASAhtgshcnvtnmtgnlta------------dflyepteyitsarqvYMIAAGIIGCLYLLCISVLFLGVKErddpyal 265 tropical clawed...
XP_426214    240 ASAhlsqyctwnpplnitdptys-----lhntsdfsepsdplshqakvYMIAAGVIGGMYLLGIIILFLGVKEkddpyal 314 chicken
XP_695343    224 ASAhtlkhcphrnltaahltnssg----teiirslalsqdflshakevYMIAAGVIGGLFLVCTVVMFLGVKErddpyap 299 zebrafish
Feature 1                                   #  ##  ###  #                           #   #        
A6NFX1       263 asgpglsflaglslttrhPPYLKLVISFLFISAAVQVEQSYLVLFCthasqlhdHVQGLVLTVLVSAVLSTPLWEWVLq- 341 human
XP_007895292 262 ksaksipffkgmklvmrhGPYVKLTTTFLFTSLALQLVQGNFALFCtyavdlrhHFQNIVLTILVSAVVTIPFWQWFLqr 341 elephant shark
A4IH46       266 vagkvipffkgfretmqfGPYLNLISSFLLISAAVQIQQSNFVLFCthaadlqdHFQNLVLTILIAAVLSIPFWQWFLq- 344 tropical clawed...
XP_426214    315 ssdraipfckglgltmkhGPYVKLAASFLLISTAVQIEQSNFILFCtqaadlhyHFQYLVVTILVSAVVSIPFWQKFLq- 393 chicken
XP_695343    300 ktdkaipfhkgfilvmkhGSYLTLTASFLFISVAIQLIQSNFVLFCtyavelrdHFQNIVLTILMSAAVSIPFWQWFLek 379 zebrafish
Feature 1                                                ##   #   #                        #  ## 
A6NFX1       342 RFGKKTSAFGIFAMVPFAILLAavp-tapVAYVVAFVSGVSIAVSLLLPWSMLPDVvddfqlqhrhgpgleTIFYSSYVF 420 human
XP_007895292 342 FGKKTAVYCGISWIIPFLILMVtipnnltVAYVVAISSGLSVASYFLLLWSMLPDVvddfrlqnphskgmePIFCSFYVF 421 elephant shark
A4IH46       345 KFGKKMAAFGISLMIPFSIMLVtis-slvVAYVVAVASGLSIAASLLLPWSMLPDVvdnfrltnpqgkgleAIFYSSFVF 423 tropical clawed...
XP_426214    394 RFGKKSAACGISWMIPFAVMLVtip-npiLAYFVAFVSGVSIAASLLLPWSMLPDVadnfhvknpyrkgheTIFYSSYVF 472 chicken
XP_695343    380 FGKKTAAFCGITWIMPFTVMLVfip-nliVAYVVAVSSGLSVAASLLLPWSMLPDVvddfrlanrnskgheAIFYSLYAF 458 zebrafish
Feature 1         ##  #                                                         
A6NFX1       421 FTKLSGACALGISTlslefsgykagvckqaeevvvtlKVLIGAVPTCMILAGLCILMVGSTPK 483 human
XP_007895292 422 FTKFAAGVSLGFSTlsldfagyetgacsqppsvaftlKLLVGAAPTGLIFIGLLIFRFYPITE 484 elephant shark
A4IH46       424 FTKLSAGIALGISTlslqfadyntslckqsysvvltlKLLIGAAPALMIIIGLTILAFYPITE 486 tropical clawed frog
XP_426214    473 FTKMSAGIGLGISAacleftgyepgicrqskdviltlKILVGGVPAVLILVGLFILLFYPITE 535 chicken
XP_695343    459 FTKFAAGISLGVSTlclqfagydtgacrqplpvvytlKLLIGAAPVACITTGLMILVVYPISE 521 zebrafish

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