Conserved Protein Domain Family
RhoGAP_BRCC3-like

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cd04405: RhoGAP_BRCC3-like 
RhoGAP_BRCC3-like: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of BRCC3-like proteins. This subgroup also contains two groups of closely related proteins, BRCC3 and DEPDC7, which both contain a C-terminal RhoGAP-like domain and an N-terminal DEP (Disheveled, Egl-10, and Pleckstrin) domain. The function(s) of BRCC3 and DEPDC7 are unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239870
Aligned: 15 rows
Threshold Bit Score: 172.9
Created: 12-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:
  • Comment:based on homology to other RhoGAPs
  • Comment:domain is lacking catalytic residues and is therefore potentially inactive
  • Citation:PMID 9262406
  • Citation:PMID 9338791

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                   #                 
AAN31126  177 LTEANVEEIWKSMTLSYLQKILGLDSLEEVLd-VKLVNSKFIIHNv-------ySVSKQGVVILDDKSkELPHWVLSAMK 248 human
AAH77330  197 LPPKVVAEVWQEQTIRRLLQLVDLPLLDSLLe-YTPVAPRIPNVKeedh-nltsNYLDREILKAFSDA-QADEWVSAAVD 273 African clawed frog
AAI14312  170 ITQRQLEHIWKKRTLMHLQCVLGLQSLHELLd-VALINPKHIVHNv-------cGVNKQNIVILKSRSeDLPHWVLSAMR 241 zebrafish
CAG31461  177 LTQENIEEIWKSMTLARLQKVLGLDCLDEVId-TKLVNSKHIVQNa-------yNVNKQGIVTLEDKSkDLPHWILSAMK 248 chicken
AAH44382  174 LTEDDIHVIWKNVTLTHLQKLVGSASLEGVLd-PAKVNPQFIVYNm-------tKVNKHGVVSLEDKTeDLPHWALSAMK 245 zebrafish
XP_419630 194 LSRRVINEVWREQTIARLLQLVDLPLLDSLLe-HQAVKPQLPQPKedsgyvitsNYLDREILKAFSDS-QTDEWLSSAID 271 chicken
AAH95813  190 LSQELMDEIWRQQTVLRLLQLIELPLLESLLegQESPRPPLHSMDsdpdllytsSYLDREILKAFSEA-QADSWLSAAVD 268 zebrafish
XP_690061 244 LPPSVVREVWQEQTVRRLSQLIDLPLLEGVLncSKIVSPPSRGSNnepdllytsSYLDREVLKAFRES-QDDDWLSAAID 322 zebrafish
CAC48255  194 LSPQVINEVWQEETIGRLLQLVDLPLLDSLLk-QQEAVPKIPQPKrqstmvnssNYLDRGILKAYSDS-QEDEWLSAAID 271 human
CAG05709  192 LSPELVEEVWQQQAVFRLLQLIELPLLEDLLegHGGLQAPGPSGGsdqdllhtsSYLDREVLKAFSEA-QADEWMSTAVE 270 Tetraodon nigrovir...
Feature 1                                                  #   #                              
AAN31126  249 CLANWPNc--SDLKQPMyl----------------gfEKDVCKTIADYYGh-LKEPLLTfHLFDAFVSVlgllq------ 303 human
AAH77330  274 CLDFLPDhmvVDVSRNLpeqqa----------pdskwKLLLFDTIGKHYSq-NRAPLLRnQLFDIHTGIaellvn----- 337 African clawed frog
AAI14312  242 CLANWPHg--GDSRNCMyp----------------gfERDVFKTVCEYFQs-LQEPLLTfRLYEAFVSVlgllq------ 296 zebrafish
CAG31461  249 CLANWPIc--SDLKQPTys----------------gfERDVFKTIVDYFGq-MKEPLLTfNFFDVFVSVlgllq------ 303 chicken
AAH44382  246 CLANWPK---YDSDQPTyl----------------gfERDVFKTVSDYFYs-LPQPLLTyQYYELFVNIlvmcgyittpk 305 zebrafish
XP_419630 272 CLEYLPDhmvVDISRNLpdqld----------kadtwKLLLFENIGRYYGq-KKEPLLS-HAPEVHSGIaellvn----- 334 chicken
AAH95813  269 CLEFLPDqlvVDVSRGLakcee----------etsqyKQLLYGVLVQHYGqsDYPPLLTnHVFDIHSGVsellvn----- 333 zebrafish
XP_690061 323 LLDFLPDhlvVEVSRELpsfsceddddcdegqsmcecKLLLFHVLEKHYGhmERKPLLSdSMADVYTEImellvn----- 397 zebrafish
CAC48255  272 CLEYLPDqmvVEISRSFpeqpd----------rtdlvKELLFDAIGRYYS--SREPLLN-HLSDVHNGIaellvn----- 333 human
CAG05709  271 CLEFLPDplvVEVSRGLlgcah----------dlprcKGLVYEVLAQHYGrtQQTPLLSnHVFDIHSGIsellgttgsat 340 Tetraodon nigrovir...
Feature 1                                                                                     
AAN31126      --------------------------------------------------------------------------------     human
AAH77330      --------------------------------------------------------------------------------     African clawed frog
AAI14312      --------------------------------------------------------------------------------     zebrafish
CAG31461      --------------------------------------------------------------------------------     chicken
AAH44382  306 sqpgkrknqeepncpqpaknpyvnpanlfrsteylllslirkeaideadspmkevfssktetkldtrrvfrgrrvsdgdr 385 zebrafish
XP_419630     --------------------------------------------------------------------------------     chicken
AAH95813      --------------------------------------------------------------------------------     zebrafish
XP_690061     --------------------------------------------------------------------------------     zebrafish
CAC48255      --------------------------------------------------------------------------------     human
CAG05709  341 trawevip------------------------------------------------------------------------ 348 Tetraodon nigrovir...
Feature 1                                                                                     
AAN31126      --------------------------------------------------------------------------------     human
AAH77330      --------------------------------------------------------------------------------     African clawed frog
AAI14312      --------------------------------------------------------------------------------     zebrafish
CAG31461      --------------------------------------------------------------------------------     chicken
AAH44382  386 ldgsyldvsqahktdvpygrlrprscslegninncaksrlfrsseslescssdksnpetdsplepnlqsslvsintsgss 465 zebrafish
XP_419630     --------------------------------------------------------------------------------     chicken
AAH95813      --------------------------------------------------------------------------------     zebrafish
XP_690061     --------------------------------------------------------------------------------     zebrafish
CAC48255      --------------------------------------------------------------------------------     human
CAG05709      --------------------------------------------------------------------------------     Tetraodon nigrovir...
Feature 1                                                                                     
AAN31126      --------------------------------------------------------------------------------     human
AAH77330      --------------------------------------------------------------------------------     African clawed frog
AAI14312      --------------------------------------------------------------------------------     zebrafish
CAG31461      --------------------------------------------------------------------------------     chicken
AAH44382  466 vssqlsadlrrnnsrpararprsignlfdieenremsassfsvhapvaeitmrpdstssvgfrglglsslhgscvdvrtg 545 zebrafish
XP_419630     --------------------------------------------------------------------------------     chicken
AAH95813      --------------------------------------------------------------------------------     zebrafish
XP_690061     --------------------------------------------------------------------------------     zebrafish
CAC48255      --------------------------------------------------------------------------------     human
CAG05709      --------------------------------------------------------------------------------     Tetraodon nigrovir...
Feature 1                                                                                     
AAN31126  304 --------------------------------------kekvAVEAFQICCLlLPPENRRKLQLLMRMMARICLnkeMPP 345 human
AAH77330  338 -------------------------------------gktepALEATQLCLKlLDSPSREEFRRLLYFMALAADp-sEFR 379 African clawed frog
AAI14312  297 --------------------------------------yqalAVEALQVCFLlLPPANRRKLQLLMRLMAKVCVnasLPP 338 zebrafish
CAG31461  304 --------------------------------------khneAIEALQISCLlLPPESRRKLQLLVRMMARISFnkdLPP 345 chicken
AAH44382  546 psfsrrcqssldlskpaparppsallthqpeqsllqpsleqvAVEALQLCTLlLPPASRRKLQLLLRMISRMSQnvdMPR 625 zebrafish
XP_419630 335 -------------------------------------gkmeqSLEAIQLYLKlLDSQIREEFRRLLYFMAVAAHn-sELK 376 chicken
AAH95813  334 -------------------------------------gkceqALESLQLCLKlQDSRSREELRRLLRFMALAGSp-hQIK 375 zebrafish
XP_690061 398 -------------------------------------grferALEVLQLTLKlLSASAREELRRLLEFMAVAADa-gNVR 439 zebrafish
CAC48255  334 -------------------------------------gkteiALEATQLLLKlLDFQNREEFRRLLYFMAVAANp-sEFK 375 human
CAG05709  349 ------------------------ptqhlcfsvssvngklaqALESVQLSLRlQDARSREELRRLLSFMATAAKp-qEVK 403 Tetraodon nigrovir...
Feature 1                   #  ##                       #                     
AAN31126  346 LCD---------GFGTRTLMVQTFSRCILcskdevdldELLAAKLVTFLMDNYQEILKVPLALQ 400 human
AAH77330  380 LNE---------ETDNRMTVKRMFCRAIVnnk---slsKGKCDLLVLFILDHHKDVFKIPGSLH 431 African clawed frog
AAI14312  339 LND---------TISTRTLMVQTFSRCVLrsaadldldDLLSSKLLVFLLDHEELLEVPASLRR 393 zebrafish
CAG31461  346 LSE---------SVRTRVLMVQAFSRCILcskdemdldELLAAKLVSFLMDNYQEILSVPSSLK 400 chicken
AAH44382  626 LHD---------VIGTRTLLVQTFSRCVLsceevddldELLATRLLSFLMDHHQEVLQVPVYLR 680 zebrafish
XP_419630 377 LQK---------ESDNRMVVKRTFSKAIInnk---slsRGKTDLLILFLVDHQKDVLKIPGTLH 428 chicken
AAH95813  376 LHK---------EIENRMAVKRAFSNAIVygt---klaKGKVDLLVLFMMDKHHDLFKIPVTLH 427 zebrafish
XP_690061 440 LHK---------ETENRMFVKKTFTRAVIqsk---swtKGNVDLLVLFMLDNHQEIFKIPGSLH 491 zebrafish
CAC48255  376 LQK---------ESDNRMVVKRIFSKAIVdnk---nlsKGKTDLLVLFLMDHQKDVFKIPGTLH 427 human
CAG05709  404 LHKevragapggPVENRMAVKRAFSSAIVysr---rlsKGKVDLMVLFMMDNHCDLFKVSAARL 464 Tetraodon nigroviridis

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