Conserved Protein Domain Family
RhoGAP_ARHGAP27_15_12_9

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cd04403: RhoGAP_ARHGAP27_15_12_9 
RhoGAP_ARHGAP27_15_12_9: GTPase-activator protein (GAP) domain for Rho-like GTPases found in ARHGAP27 (also called CAMGAP1), ARHGAP15, 12 and 9-like proteins; This subgroup of ARHGAPs are multidomain proteins that contain RhoGAP, PH, SH3 and WW domains. Most members that are studied show GAP activity towards Rac1, some additionally show activity towards Cdc42. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Statistics
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PSSM-Id: 239868
Aligned: 11 rows
Threshold Bit Score: 310.477
Created: 14-Apr-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative GTPasecatalytic
Feature 1:putative GTPase interaction site [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                           #                                         
AAI01392  399 FGCALAALCERERSRVPRFVQQCIRAVEaRGLDIDGLYRISGNLATIQKLRYKVdhderl------------------dl 460  human
XP_693612 416 FGCHLHNLCSQEKTRVPSFVEKCIRAVEkRGLEIDGLYRVSGNLAVIQKLRFKAdhedl--------------------d 475  zebrafish
AAI15364  607 FGSNLANLCQRENGTVPKFVKLCIEHVEeHGLDIDGIYRVSGNLAVIQKLRFAVnhdekl------------------dl 668  human
AAH46844  584 FGSSLTSLCQRENTTVPNFVKMCIDHVEaHGLDVDGLYRVSGNLAVIQKLRFAVthdekl------------------dl 645  African clawed frog
XP_418575 745 FGSNLTSLCQRENSTVPKFVKLCIEHVEeHGLDVDGLYRVSGNLAVIQKLRFAVnhdekl------------------dl 806  chicken
XP_709084 689 FGCSLTALCQREGTSVPNFVKMCIEHVEnTGLNVDGLYRVSGNLAVIQKLRFAVnhdekv------------------nl 750  zebrafish
NP_722542 285 FGSHLHTVCEREHSTVPWFVKQCIEAVEkRGLDVDGIYRVSGNLATIQKLRFIVnqeekl------------------nl 346  house mouse
CAF96509  697 FGCCLEMLCEREKSTVPRFVRLCTEAVEkRGLDSDGIYRVSGNLAVIQKLRFLVnheravttdgrymfpaelvqeeklnl 776  Tetraodon nigrovi...
XP_885660 530 FGCQLESLCQREGDTVPSFVRLCVAAVDkRGLDVDGIYRVSGNLAVVQKLRFLVdreraitsdgrymfpeqpgqegrldl 609  cattle
NP_115885 540 FGCQLESLCQREGDTVPSFLRLCIAAVDkRGLDVDGIYRVSGNLAVVQKLRFLVdreravtsdgryvfpeqpgqegrldl 619  human
1176535   608 FGSTLSAICQHENSLVPKFIRVITEVIEsKGLETDGIYRVSGNLSAVQKIRCQAdqdny--------------------k 667  Caenorhabditis el...
Feature 1                    #   #                                                            
AAI01392  461 ddgrWEDVHVITGALKLFFRELPEPLFPfSHFRQFIAAiklqdqarRSRCVRDLVRsLPAPNHDTLRMLFQHLCRVIEHG 540  human
XP_693612 476 leegNWDIHVITGALKLFFRELQEPLFPyNLFNEFICAiktpdyysKISHMRNLVRsLPPPNHDTMEALFSHLRRVIQHG 555  zebrafish
AAI15364  669 ndskWEDIHVITGALKMFFRELPEPLFTfNHFNDFVNAikqe-prqRVAAVKDLIRqLPKPNQDTMQILFRHLRRVIENG 747  human
AAH46844  646 ndckWEDIHVITGALKMFFRELPEPLFTfNYFNDFVNAikqe-pklRVQAVKDLIKqLPKPNHDTMQVLFKHLKKVVETG 724  African clawed frog
XP_418575 807 ndskWEDIHVITGALKMFFRELPEPLFTyNHFNDFVNAikqe-prqRVHAVKDLIKqLPKPNQDTMQVLFRHLKRVVENG 885  chicken
XP_709084 751 ddskWEDIHVTTGALKMLFRELPEPLFTyASFNDFVEAiknsdykqRVQSIKDLIKqLPKPNQETMKVLFKHLKRVIDHG 830  zebrafish
NP_722542 347 ddsqWEDIHVVTGALKMFFRELSEPLFPySFFERFVEAikkqdsneKIETMRSLVKrLPPPNHDTMKILFRHLTKIVAKA 426  house mouse
CAF96509  777 dqsdWEDIHVITGALKLFFRELPEPLVPfGFFTDIVETvkmsdymdKVERLKCLVLnMPPPNHDTLKFMCRHLQRVLEHS 856  Tetraodon nigrovi...
XP_885660 610 dsaeWDDIHVITGALKLFLRELPQPLVPsLLLPDFRAAvalteseqCLSQIQELISsMPKPNHDTLRYLLEHLCRVIAHS 689  cattle
NP_115885 620 dsteWDDIHVVTGALKLFLRELPQPLVPpLLLPHFRAAlalseseqCLSQIQELIGsMPKPNHDTLRYLLEHLCRVIAHS 699  human
1176535   668 alvsEEDIHVLTGALKLFFRELTDPLFPiSLHKEYTSAmqmpnattRFKKFEELLSrLPNENRETLKMLLRHLNRVASHS 747  Caenorhabditis el...
Feature 1             #  ##                                                    #         
AAI01392  541 EQNRMSVQSVAIVFGPTLLrpevee------------------------------tsmpmtMVFQNQVVELILQQ 585  human
XP_693612 556 NENRMTVQNVAIVFGPTLLkpeeet------------------------------asiatyMVFQNQIVEFLLSE 600  zebrafish
AAI15364  748 EKNRMTYQSIAIVFGPTLLkpeket------------------------------gniavhTVYQNQIVELILLE 792  human
AAH46844  725 EKNRMTYQSLAIVFGPTLLkpetet------------------------------gniaihTVYQNQIVELILLE 769  African clawed frog
XP_418575 886 EKNRMTYQSVAIVFGPTLLkpeket------------------------------gniavhTVYQNQIVELILLE 930  chicken
XP_709084 831 EVNRMTTQSVAIVFGPTLLrpeiet------------------------------gnmavhMVYQNQIVELILLE 875  zebrafish
NP_722542 427 SQNLMSTQSLGIVFGPTLLraenes------------------------------gnvavhMVYQNQIAEFMLTE 471  house mouse
CAF96509  857 DANRMTTQNIGIVFGPTLMrperdn------------------------------gnmavnMIYQNQAVELILHE 901  Tetraodon nigroviridis
XP_885660 690 DKNRMTPHNLGIVFGPTLFrpeqet------------------------------sdpvahVLYPGQVVQLMLTN 734  cattle
NP_115885 700 DKNRMTPHNLGIVFGPTLFrpeqet------------------------------sdpaahALYPGQLVQLMLTN 744  human
1176535   748 SQNRMQQHNLAIVFGPTLFhngdgavnlatknkkagkkakpskkeetqatpvqsnshlafsMIMQSQIVQYLLES 822  Caenorhabditis elegans

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