3CZH,3C6G


Conserved Protein Domain Family
CYP2R1

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cd20661: CYP2R1 
Click on image for an interactive view with Cn3D
cytochrome P450 2R1
CYP2R1, also called vitamin D 25-hydroxylase (EC 1.14.14.24), is a microsomal enzyme that is required for the activation of vitamin D; it catalyzes the initial step converting vitamin D into 25-hydroxyvitamin D (25(OH)D), the major circulating metabolite of vitamin D. The 1alpha-hydroxylation of 25(OH)D by CYP27B1 generates the fully active vitamin D metabolite, 1,25-dihydroxyvitamin D (1,25(OH)2D). Mutations in the CYP2R1 gene are associated with an atypical form of vitamin D-deficiency rickets, which has been classified as vitamin D dependent rickets type 1B. CYP2R1 belongs to family 2 of the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.
Statistics
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PSSM-Id: 410754
Aligned: 8 rows
Threshold Bit Score: 870.673
Created: 1-Apr-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
heme bindingchemical
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:heme binding site [chemical binding site]
Evidence:
  • Structure:3C6G: Human CYP2R1 binds heme; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                       #              ##       #   #    
3CZH_A        36 PHVYMRKQSqvYGEIFSLDlggiSTVVLNgYDVVKECLVHQSEIFADRPCLPLFMKMTkmGGLLNSRYGRGWVDHRRLAV 115 human
3C6G_A        36 PHVYMRKQSqvYGEIFSLDlggiSTVVLNgYDVVKECLVHQSEIFADRPCLPLFMKMTkmGGLLNSRYGRGWVDHRRLAV 115 human
AAI55663      49 PHVYMKRQSdiHGQIFSLDlggiPTVILNgYDAIKECLYHQSEVFADRPSLPLFQKMTkmGGLLNCKYGRGWIEHHKLAV 128 zebrafish
AAI54114      54 PHVYMKKQSkiHGQIFSLDlggiSTVVLNgYDAVKECLVRQSDVFADRPSLPLFKKLTnmGGLLNAKYGRCWTEHRKLAV 133 western clawed ...
XP_017931441 140 PHVYMRRQSqiHGQIFSLDlggiSAVVLNgYDAVKECLVHQSEIFADRPSLPLFKKLTnmGGLLNSKYGRGWTEHRKLAV 219 Manacus vitellinus
XP_005989762  67 PHVYMKKQSniYGQIFSLDlggiSAVVINgYDAIKECLVHQSENFADRPSLPLFQKLTnmGGLLNSKYGQGWAEHRKLVV 146 Latimeria chalu...
XP_007886041  68 PHVFMKKQSetHGQIFSLDlggiSTVIVNgYDAVKECLIRQSDIFVDRPSLPLFVKLTnmGGLLNCKYGRGWTEHRKLTV 147 Callorhinchus m...
Q6VVX0        62 PHVYMRKQSqvYGEIFSLDlggiSTVVLNgYDVVKECLVHQSEIFADRPCLPLFMKMTkmGGLLNSRYGRGWVDHRRLAV 141 human
Feature 1          #                                              #                              
3CZH_A       116 NSFRYFgygqksfESKILEETKFFNDAIETYkgrpfdFKQLITNAVSNITNLIIFGERFTYedTDFQHMIELFSENVELA 195 human
3C6G_A       116 NSFRYFgygqksfESKILEETKFFNDAIETYkgrpfdFKQLITNAVSNITNLIIFGERFTYedTDFQHMIELFSENVELA 195 human
AAI55663     129 NCFRYFgtg-qrmFERISEECLYFLDAIDQHqgkpfnPKHLVTNAVSNITNLIIFGQRFTYddGDFQHMIEIFSENVELA 207 zebrafish
AAI54114     134 SCFRTFgcsqksfESKISEECLFFLDAIDSYkgkaldPKHLVTIAVSNVSNLILFGERFRYddNDFLHMIEIFSENIELA 213 western clawed ...
XP_017931441 220 NTFRTFgygqrsfEHKISEESVFFLDAIDTYkgrpfdLKHLITNAVSNITNLIIFGERFTYedTEFQHMIEIFSENIELA 299 Manacus vitellinus
XP_005989762 147 SCFRYFgygqkcfESKISEECMFLIEAVDTYkdkpfdPKHLITNAVSNITNIIIFGERFSYedTEFQHMVEIFSQNVELA 226 Latimeria chalu...
XP_007886041 148 NCFRCFgpgqksfENKIAEECMFFLDAVDTYkgkpfdAKLLVTNAVSNITNLIIFGERFTYddTEYQHMMEIFSENIELA 227 Callorhinchus m...
Q6VVX0       142 NSFRYFgygqksfESKILEETKFFNDAIETYkgrpfdFKQLITNAVSNITNLIIFGERFTYedTDFQHMIELFSENVELA 221 human
Feature 1                                                                                        
3CZH_A       196 AsasvflynafpwigilpfgkHQQLFRNAAVVYDFLSRLIEKAsvnrkpqlpQHFVDAYLDEMdqgkndpsstfSKENLI 275 human
3C6G_A       196 AsasvflynafpwigilpfgkHQQLFRNAAVVYDFLSRLIEKAsvnrkpqlpQHFVDAYLDEMdqgkndpsstfSKENLI 275 human
AAI55663     208 AsswaflynafpwmeylpfgkHQRLFRNANEVYKFLLQIIRRFsqgrvpqspQHYIDAYLDEMeqstpdkatsfSQDNLI 287 zebrafish
AAI54114     214 TsawvflynafpligflpfgkHQQLFRNASEVYDFLLQIIGRFsenrkpqspRHFIDAYMDEMerneadpdstySMENLI 293 western clawed ...
XP_017931441 300 AsasvflynafpwigilpfgkHQQLFRNAAEVYDFLHDLIERVsenrkpqspRHFVDAYLDEMdcnendpestySRENLI 379 Manacus vitellinus
XP_005989762 227 AsawaflynsfpwigilpfgkHQLLFKNASEVYDFLLKSIKYFsenrkpqspRHFIDTYLDELdhnaknpestySMENLI 306 Latimeria chalu...
XP_007886041 228 AsawaflynafpwigllpfgdHQRLFKNAAQVYDFLLKIIQRFsenrtpqnpRHLIDSYLDELekntndletsfTMENLI 307 Callorhinchus m...
Q6VVX0       222 AsasvflynafpwigilpfgkHQQLFRNAAVVYDFLSRLIEKAsvnrkpqlpQHFVDAYLDEMdqgkndpsstfSKENLI 301 human
Feature 1             #  ##  ##  #                                                        #   # #
3CZH_A       276 FSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMgpngkpswddkckMPYTEAVLHEVLRFCNIVPLGIFH 355 human
3C6G_A       276 FSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMgpngkpswddkckMPYTEAVLHEVLRFCNIVPLGIFH 355 human
AAI55663     288 FSVGELIIAGTETTTNCLRWAMLYMALYPRIQEKVQMEIDSVLngrqpa-fedrqrMPYVEAVLHEVLRLCNIVPLGIFR 366 zebrafish
AAI54114     294 FSVGELIIAGTETTTNVLRWAMLFMALYPNIQGQVQKEIDGVVglnrmptfeeksrMPYTEAVLHEILRYCNIAPLGIFH 373 western clawed ...
XP_017931441 380 FSVGELIIAGTETTTNVLRWAVLFMALYPNIQGQVQKEVDLVIgpnkmptfeekckMPYTEAVLHEVLRFCNIVPLGIFH 459 Manacus vitellinus
XP_005989762 307 FTVGELLIAGTETTTNALRWAVLYMALYPNIQEKVQKEVDFVVgqnrmpmledrgrMPYTEAVLHEVLRFCNIAPLGIFH 386 Latimeria chalu...
XP_007886041 308 FTVGEIIIAGTETTTNALRWAILYVALYPNIQGKVHQEIDAVVgqnqmpsldhksqMPYTEAVLHEVLRFCNIAPLGIFR 387 Callorhinchus m...
Q6VVX0       302 FSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMgpngkpswddkckMPYTEAVLHEVLRFCNIVPLGIFH 381 human
Feature 1                              #                                   ###   # ###   #       
3CZH_A       356 ATSEDAVVRGYSIPKGTTVITNLYSVHfDEKYWrDPEVFHPERFLDssgYFAKKEalVPFSLGRRHCLGEHLARMEMFLF 435 human
3C6G_A       356 ATSEDAVVRGYSIPKGTTVITNLYSVHfDEKYWrDPEVFHPERFLDssgYFAKKEalVPFSLGRRHCLGEHLARMEMFLF 435 human
AAI55663     367 ATSQDAVVRGYTIPKGTMVITNLYSVHfDEKYWsDPSIFCPERFLDcngKFIRHEafLPFSIGKRHCLGEQLARLEMFLF 446 zebrafish
AAI54114     374 ATSRDTVVRGYSIPEGTTVITNLYSVHfDEKYWtDPEIFYPERFLDsagQFTKKEafVPFSLGRRHCLGEQLARMEMYLF 453 western clawed ...
XP_017931441 460 ATSKDTVVRGYSIPEGTTVITNLYSVHfDEKYWsNPEVFFPERFLDsngQFVKKDafIPFSLGRRHCLGEQLARMEMFLF 539 Manacus vitellinus
XP_005989762 387 ATFKDTIVRGYSIPQGTTVITNLYSVHfDEKYWmSPEQFSPERFLDsngNFIKKEafVPFSLGKRHCLGEQLARMELFLF 466 Latimeria chalu...
XP_007886041 388 ATTKDSTVRGYSIPKGTMVITNLYSVHfDEKYWsNPEIFCPERFLDsngQFVKKEafVPFSLGRRHCLGEQLARIELFLF 467 Callorhinchus m...
Q6VVX0       382 ATSEDAVVRGYSIPKGTTVITNLYSVHfDEKYWrDPEVFHPERFLDssgYFAKKEalVPFSLGRRHCLGEHLARMEMFLF 461 human
Feature 1                                            
3CZH_A       436 FTALLQRFHLHfpheLVPDLKPRLgMTLQPQPYLIC 471 human
3C6G_A       436 FTALLQRFHLHfpheLVPDLKPRLgMTLQPQPYLIC 471 human
AAI55663     447 FTTLLQRFHLQfsegFIPSLSAKLgMTLQPQPYSIC 482 zebrafish
AAI54114     454 FTALLQRFHLHfpqgFVPNLRPKLgMTLQPHPYVIC 489 western clawed frog
XP_017931441 540 FTSLLQRFHLHfphgVIPDLKPRLgMTLQPQPYLIC 575 Manacus vitellinus
XP_005989762 467 FTALLKKFYWHlpqgSIPNLKPKLgMTLQPYPYLIC 502 Latimeria chalumnae
XP_007886041 468 FTALLQRFHLHfppgTIPNLKAKLgMTLQPHPYLVA 503 Callorhinchus milii
Q6VVX0       462 FTALLQRFHLHfpheLVPDLKPRLgMTLQPQPYLIC 497 human

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