5Z3G,6EM3,5SUM


Conserved Protein Domain Family
Nsa1

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cd22858: Nsa1 
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Ribosome Biogenesis Protein Nsa1
Ribosome biogenesis protein Nsa1 (Nop7-associated 1) from fungi is an essential factor for ribosome assembly. In cooperation with the assembly factor Rix7, Nsa1 participates in an early cleavage of the pre-rRNA processing pathway. Rix7 is a type II double ring, AAA-ATPase, that may mediate the release of Nsa1 from nucleolar pre-60S particles. The release of Nsa1 from a discrete preribosomal particle may trigger the progression of 60S ribosome biogenesis. Nsa1 is essential for cell viability in yeast. It contains an N-terminal seven-bladed beta-propeller WD40 domain that associates with the D1-AAA domain of the AAA-ATPase Rix7, and a flexible lysine-rich C-terminus that extends outward from the WD40 domain, and is required for nucleolar localization.
Statistics
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PSSM-Id: 439304
Aligned: 76 rows
Threshold Bit Score: 281.028
Created: 23-Feb-2021
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:25S rRNA binding site [nucleic acid binding site]
Evidence:
  • Structure:5Z3G: Saccharomyces cerevisiae Nsa1 binds to 25S rRNA in the nucleolar pre-60S ribosome; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
5Z3G_V      1 MRLLVSCVDsGSIKEVLCNIGTDTsv------qsALQPFHVAPHLAEGlkAYVDRMWVIs-----eDEAILARn--sGVV 67  Saccharomyces cere...
ANZ75794    1 MKLLVALEDtGSLKEIECLRGTDTsv------qtAKQPISIVNHAVESraTHILKFLVTs-----dSKYLVAArk-gGDI 68  Komagataella pastoris
ODQ65709    1 MKVLASAEEsGAIKFAVFPLGTDTsk------qtSPQPSIIKTFNAEGrdKAVQQMIMVtvd--hrKYIAVARk--gGYV 70  Nadsonia fulvescen...
ODQ72544    1 MKVLVAAEDsGSLKDISFPFGTNTsv------qqSTQPTITTFASAGRs-SYVQRMIIAkls-tgkEYICIARk--gGII 70  Lipomyces starkeyi...
Q6CEC9      1 MKIFLAAEDtGAIKEVVFDEGMDTsv------qdGPQPLITSFAALGKl-KHIQKLALVtts--kgTKYIAAArk-nGTI 70  Yarrowia lipolytic...
TID29848    1 MKIVVACEDtGALKVICAQHGTDTskpv--desnPLAPVKISTHAEKDn-SRKTRVLHLvqs-qitKNIIVTRl--dGSI 74  [Candida] inconspicua
CDO56294    1 MKVLVADEDsGSIKEIVFEKGTDTsq------ktAKQPISTTTFGQLGraRYTQKLALIng----gKHVMTARs--dGSV 68  Geotrichum candidum
KGK38247    1 MKLIVSCEDtGALKVVTAQHGVDTsrpapkddpnAVAPPTITTHATGY--SRKSRVVHMvks-pktGNIAVTRs--dGSV 75  Pichia kudriavzevii
CUS11869    1 MKFAVGDDV-GQLKIITASRGTDTsl-------kTSARARISTYFTPDgrDPVYAVCKIdryqgeeRAGLVSPprtkAGL 72  summer truffle
PWW71819    1 MKFAIGDDV-GQLKIITAPRGTDTsl------ktSARPRISTYFTPDRk-DSVYAVCKIdkyrgeeRAGLVAVvftfGKV 72  white Piedmont tru...
Feature 1                                                                                     
5Z3G_V     68 ELVKIskhlkenealqvdpkgesknekslsddlpkfdiSEFEITSSVSDlfddakleslssksvkrtkLVDGFVTLCPik 147 Saccharomyces cere...
ANZ75794   69 VVYER---------------------------------DTFEEVKRYTNmt---------------anESSNFVSLIQd- 99  Komagataella pastoris
ODQ65709   71 QLLNL---------------------------------PSTDVADTEGAeivcdw-------fgcansTADAIVSLLC-- 108 Nadsonia fulvescen...
ODQ72544   71 QLYDVn--------------------------------PPHALFVEWKDmt---------------hpPDDAFVGLEY-- 101 Lipomyces starkeyi...
Q6CEC9     71 EVYPYll------------------------------tEESTPIFVYSAeg----------------aEKCPWIGLTQy- 103 Yarrowia lipolytic...
TID29848   75 QVYDTskvlnqdqk----------------sskkkddeETEELLPQLYQykqlie--------pptssNSETFVNLIVd- 129 [Candida] inconspicua
CDO56294   69 QIYSLh--------------------------------DSEEPLHEWGPgtttt----------tsnsATDRVVELLVlp 106 Geotrichum candidum
KGK38247   76 QVYDTaklrn-----------------------nevcnDDSELLPLLSEhknvip--------estnkDNEVFVDLAVd- 123 Pichia kudriavzevii
CUS11869   73 SAGQLiaavvftsgrvg---------vvdtsvspisgeGNYLLYTHASEttpp------------taaAASPVISAGM-- 129 summer truffle
PWW71819   73 KIVDTsvsp-------------------------iygeEEYLLYTHASAetps------------ttaAASPVISAGV-- 113 white Piedmont tru...
Feature 1                                                                                     
5Z3G_V    148 k--dsSNNTFVAATks-----gLLHIIKkgedk--klikLASLGLKAPv-----EFLQLYDLEdt-dtDKYIFAYGGE-- 210 Saccharomyces cere...
ANZ75794  100 -----STNLIYSCCen-----gVVSVIDlntlnhddndtQQPTNLQLT------GPVSCFVLNp---nQTGIFAYGGK-- 158 Komagataella pastoris
ODQ65709  109 -----VGKLLITCSse-----gLICIYDls--------nLKSKETYAKln--vtGPVSAFVNHy---qTSGIFAVGGK-- 163 Nadsonia fulvescen...
ODQ72544  102 -----VEGKLSSCTatgklimrDLHSISd---------sTNDYYTLLG------EPINAFRVHp---nQPNIIAYGGKer 158 Lipomyces starkeyi...
Q6CEC9    104 -----DDNTVVAGLed-----gRLFFLDvsk-----vtiESDKPYDAPtas-vkGPLACFALDre--lYPGKIAVGGK-- 163 Yarrowia lipolytic...
TID29848  130 -----DIGRVLVPTsk-----gNVFIWTsee-----kiaQKPHLCKVPla--kdEIIEAFQVHhg-aeNIDYVAYGGK-- 189 [Candida] inconspicua
CDO56294  107 qlskkEKEPVVVLScsl---egKIVKFSlaaky--sesvTDSLTVKGPv-----DAIAVREGSatpgyASFVAAVGGQ-- 174 Geotrichum candidum
KGK38247  124 -----DIGRLLTATnk-----gTLFIWSsee-----klsDNPANYQLPlk--pnEVVETFQLHpgktdDTLYIAYGGK-- 184 Pichia kudriavzevii
CUS11869  130 -----QDGILYLFRang---qvVFHRFDg----------ESPSVKTVPltg-diAAGAVFTEHlv-ngWPSAIAIGGR-- 187 summer truffle
PWW71819  114 -----QHGILYLFRasg---qvVFYRFD-----------EEPPSVKTVplsaniAAGAIFTEHlv-ngWPSAIAIGGA-- 171 white Piedmont tru...
Feature 1                                                     #  ###  # #                     
5Z3G_V    211 ENLIKLVEIdss--------------------------fqSLKQIWEAKNVKNDRLDMRVPVWPMALRFLEPSPGkte-- 262 Saccharomyces cere...
ANZ75794  159 ENEIKVISItn----------------------------gKLEQLWESKNVSLDHLRLPVPVWISGINFLNTDSAkgqt- 209 Komagataella pastoris
ODQ65709  164 ERDLEIIKLweetke-------------------psatefSIKSLWKAKNVKNNSLDLRVPVWITGIQFLKETIRena-- 222 Nadsonia fulvescen...
ODQ72544  159 ELEISVIENicrresdsttdsesdqssswyiaaiptgrtlSRRKLWKAKNVKNDELDLRVPVWISDIRFLDVNRNsetd- 237 Lipomyces starkeyi...
Q6CEC9    164 ERDLEVFGWavkg------------------------devTVRSEFQARNVKSNEIDMRVPVWISGILFQASDKDgf--- 216 Yarrowia lipolytic...
TID29848  190 ETDLRIVKLpslk-----------------------kkgeEAEVVFKAKNMSNTRLELRVPVHIKNILFAKDSSTnaf-- 244 [Candida] inconspicua
CDO56294  175 ERETEIYKFewatasagik-----------qeegeedaksIATSLWQARNVKNDRLHLRVPVWIRHIAFLPAAADnly-- 241 Geotrichum candidum
KGK38247  185 ETDLRIVKLptss-----------------------ghseTPEIVFAAKNVSNSKLELRVPIHIKKILFDKSSTPenf-- 239 Pichia kudriavzevii
CUS11869  188 KRDLEIFEPttg--------------------------egGWKSVWKAKNVKQDRLGLEVPVYIRRILFLGTGGVeaaan 241 summer truffle
PWW71819  172 KRDLEVFEPtte--------------------------egEWRSVWKAKNVKQDKLGLEVPVYIRRILFLGTGGGeatpd 225 white Piedmont tru...
Feature 1                          #                    ####                                  
5Z3G_V    263 -------------------kgKLNYQFAAITRWSHLTKYSTQHGRKPFAQIDllp------nrePLSQMEVFDAKgenvv 317 Saccharomyces cere...
ANZ75794  210 -----------------gyhlLAISRYGHIRVYKTWLKRRPVKNFQPTTKSLr-----------TLTHTSTNLYA----- 256 Komagataella pastoris
ODQ65709  223 ------------------wsiLTVTRYGQVRLYDTVHGRRPVSSNEASKHPIssia-----esnDSNQVIISDTHst--- 276 Nadsonia fulvescen...
ODQ72544  238 ------------------frlAISTRFGHVRVYETKYSRKPIVNVEVGDHPLials-----pyiNDHEIIYCDTNs---- 290 Lipomyces starkeyi...
Q6CEC9    217 -------------------rvITATRHGQIRVYETWHGKRPKWDFKVTKDPLrtla-----pgmDASNVVSSDAH----- 267 Yarrowia lipolytic...
TID29848  245 -------------------klYTFTAVGDMRYYDSAAGRKPRSSVLILPKKA------------PITKAIWLGNHl---- 289 [Candida] inconspicua
CDO56294  242 -------------------klQIVTRSGLVRFYDSTEGRRPRQEVRASHEPVstva-----yspATGDVVVSDTK----- 292 Geotrichum candidum
KGK38247  240 -------------------klYTFTQWGDLRFYDSSQGRKPRYSKLILPSKG------------PVTNAIWMNDDf---- 284 Pichia kudriavzevii
CUS11869  242 ttathpggpttvqtsgrkyrlATGTHHSHLRIYDTAVSRRPVFTATLTKSPVlslhlhpstqspTSTPLTAPNTSpes-- 319 summer truffle
PWW71819  226 ttavhpgrpkavqtsgskyrlATGTHHSHLRIYDAAVSRRPIFTATLTRSPIlslhlhpstqspTSTPLTAPNTPpes-- 303 white Piedmont tru...
Feature 1                                                  ####  #                            
5Z3G_V    318 sslgnfqsetFNELNVITTDyk--------kNVFKFDgn----gRMLGKVGRdditgsSTYIHVHDG-----KYLLQGGL 380 Saccharomyces cere...
ANZ75794  257 ----------VCSDSAGLVG-----------KFSLKDg------KMVGKYHGs-----VGFVRALYNyr--hSVIATGGL 302 Komagataella pastoris
ODQ65709  277 --------tlLFDTELKSTTlafrpagscarNGAEGKhae-vkgKLVGKFAGa-----TGAVQNNEIe---qPLVAAGGL 339 Nadsonia fulvescen...
ODQ72544  291 ---------tTARFNLINGCkgghy-sgaagSVLCLDsffpqqeGVMIEVNEa----vESSVARVPSgd--vPLLATGGL 354 Lipomyces starkeyi...
Q6CEC9    268 ----------SSTFKFNFADnekivlknkdnNQNKEHnrk--spCVVEKFPGs-----LGAVLHLVTtd--nGLLATVGL 328 Yarrowia lipolytic...
TID29848  290 ----------VVCDNRGTVV-----------KVEPSTg------SQICQFKGq-----IGSIQALYNfn--gTILGTSGS 335 [Candida] inconspicua
CDO56294  293 ----------SSTYLLSPQD-----------SGAKGAaaa-aplKMRGKLTGs-----TGAVKALALygphaELIVAGGL 345 Geotrichum candidum
KGK38247  285 ----------VVTNTSGIVE-----------KVNSTSg------SQVCQFKDh-----IGSIQSLFNfn--dSILVTAGT 330 Pichia kudriavzevii
CUS11869  320 -------sttSSPHNWIYSDsng------hfALYSSSt-----rREVGSYKGs-----TGAVNATATss--gDVVAGVGF 374 summer truffle
PWW71819  304 -------sktSSLHNWIYSDsn--------gHFALYNst---trREAGIYKGs-----TGAVNATATfs--gDVVAGVGF 358 white Piedmont tru...
Feature 1                                                                                     
5Z3G_V    381 DRYVRIFDIk-TNKMLVKVYVGsRINFIVMLDDVEIEmplsps-------------akaakgKQKRKVTELEEDADEl-- 444 Saccharomyces cere...
ANZ75794  303 DRYVRVYDLd-TCRILANVFVTsQVTDIIMLEDGEKLmee-------------------kmiRKEKEREQAVEEAEAl-- 360 Komagataella pastoris
ODQ65709  340 DRYVRVFDLk-TRECVSKIYMGtEITAVWIIEGNENDk-----------------------pSLKKRKKDAEADDEEl-- 393 Nadsonia fulvescen...
ODQ72544  355 DRFLRVYNLq-TRELVAKVFVGaKLSAVCIVDGNSTVp-----------------------sEPVSERESDEEDDEElvd 410 Lipomyces starkeyi...
Q6CEC9    329 DRYLRIFDLe-TTECTAKMFVGtQVSSLLFVDTERKTa------------------------QEKHVEETAEKEDDEl-- 381 Yarrowia lipolytic...
TID29848  336 DRYVRAYNNe-TRDCIVKVFIGtQSNALAIIEDNESLkrhkaniigdta-leaikkkeaweeKKLQEQEEEESDEEEl-- 411 [Candida] inconspicua
CDO56294  346 DRYLRVFENgaERACVGKVFVGtHITAIAVISGFEDEagevadv-----------aaaavgvKREREDNDDEEGDEL--- 411 Geotrichum candidum
KGK38247  331 DRYVRAYNNk-TRDCIVKVFVGtQSNAVILLEDSETLgrhkaniigdralesirkqeeymarKASAAAEDSGEESDEde- 408 Pichia kudriavzevii
CUS11869  375 DRYLRVYEGa-GREIVVKAYFRsKGTAVAVLDVGDDVi------------------------EVEKSLEEGEEEEEEe-- 427 summer truffle
PWW71819  359 DRYLRVYEGa-GREIVVKAYVRsKGTAVVVLDGRDEM-------------------------IEVEKSREEEEEEKV--- 409 white Piedmont tru...
Feature 1                  
5Z3G_V    445 --WNKLEGKVAAS 455 Saccharomyces cerevisiae S288C
ANZ75794  361 --WEELENNSSTR 371 Komagataella pastoris
ODQ65709  394 --WEALEGGVDGG 404 Nadsonia fulvescens var. elongata DSM 6958
ODQ72544  411 sdRVKTEGERKRR 423 Lipomyces starkeyi NRRL Y-11557
Q6CEC9    382 --WNDLDKVEKKS 392 Yarrowia lipolytica CLIB122
TID29848  412 --WSKLESSITPR 422 [Candida] inconspicua
CDO56294  412 --WNELEEVSNAT 422 Geotrichum candidum
KGK38247  409 -lWSKLDSSSVTQ 420 Pichia kudriavzevii
CUS11869  428 -vWGEMEEVVGSG 439 summer truffle
PWW71819  410 --WGEMEEVVGRG 420 white Piedmont truffle

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