Conserved Protein Domain Family
Arfrp1

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cd04160: Arfrp1 
Arf-related protein 1 (Arfrp1)
Arfrp1 (Arf-related protein 1), formerly known as ARP, is a membrane-associated Arf family member that lacks the N-terminal myristoylation motif. Arfrp1 is mainly associated with the trans-Golgi compartment and the trans-Golgi network, where it regulates the targeting of Arl1 and the GRIP domain-containing proteins, golgin-97 and golgin-245, onto Golgi membranes. It is also involved in the anterograde transport of the vesicular stomatitis virus G protein from the Golgi to the plasma membrane, and in the retrograde transport of TGN38 and Shiga toxin from endosomes to the trans-Golgi network. Arfrp1 also inhibits Arf/Sec7-dependent activation of phospholipase D. Deletion of Arfrp1 in mice causes embryonic lethality at the gastrulation stage and apoptosis of mesodermal cells, indicating its importance in development.
Statistics
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PSSM-Id: 206725
Aligned: 11 rows
Threshold Bit Score: 241.093
Created: 23-Sep-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:Based on alignment to Arl2

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1               #######                      ##                      #                   
EAL31986      19 CVVILGLDNAGKTTYLEAAKTkftrnykglNPTKITTTVGLNIGTIDVq-gVRLNFWDLGGQQELQSLWDKYYQESHGVI 97  Drosophila pseu...
AAW26226      19 SVLILGLDGAGKTTYLERAKInfvpnyksiPMQKITTTVGLNIGYIEVg-gIRLKFWDLGGQEELQSLWDKYYAESNGVI 97  Schistosoma jap...
EAL17716      19 SVVIIGLDNAGKTTLLERIKTmynp-tpgmAPDKIGPTIGQNIGKISLp-sTTLLFYDLGGQRDIRTIWEKYYDECHAVV 96  Cryptococcus ne...
AAF46445      19 CVVILGLDNAGKTTYLEAAKTtftrnykglNPSKITTTVGLNIGTIDVq-gVRLNFWDLGGQQELQSLWDKYYQESHGVI 97  fruit fly
NP_015274     19 SILILGLDNAGKTTFLETLKKeysl--afkALEKIQPTVGQNVATIPVdskQILKFWDVGGQESLRSMWSEYYSLCHGII 96  baker's yeast
AAV38469      19 CILILGLDNAGKTTFLEQSKTrfnknykgmSLSKITTTVGLNIGTVDVg-kARLMFWDLGGQEELQSLWDKYYAECHGVI 97  human
AAH54219      19 CILILGLDNAGKTTFLEQTKIqfsrnykgmNLSKITTTVGLNIGTIDVg-kVRLMFWDLGGQEELQSLWDKYYAESHGVI 97  African clawed ...
XP_638926     19 FILILGLDNSGKTTLLEQIKTkytk-ipglPPHKIVPTVGLNIARTQFq-dIKLIYWDLGGQTQLRTIWNKFFSDVHAII 96  Dictyostelium d...
AAA87882      19 NVLILGIDKAGKTTFLEKLKTiysi-seglPHDRIVPTVGLNIGRIEVs-nAKIVFWDLGGQPGLRSIWEKYYEEAHALI 96  thale cress
NP_001013307  19 CILILGLDNAGKTTFLEQTKTrfsknykgmNLSKITTTVGLNIGTIDVg-kARLMFWDLGGQEELQSLWDKYYAESHGVI 97  zebrafish
NP_491094     19 YVVIVGLDNAGKTTFLEQTKShfvkdygvlNPSKITATVGLNTGNVELn-nTCLHFWDLGGQESLRELWATYYDDANAMI 97  Caenorhabditis ...
Feature 1                                            ## #                                        
EAL31986      98 YVIDSNDReRMDESKVIFDKMIknelLSGVPLLILANKQDLPdvmgvrEIKPVFqqaga--------------------- 156 Drosophila pseu...
AAW26226      98 YVIDSADSdRFNESRNAFDKMVrnpvLEGVPLLVLANKQDMQnafhlsEINKVFydslh--------------------- 156 Schistosoma jap...
EAL17716      97 FVLDATDQaRLSETWEVFDEVLnsprLLNLPLLLLANKQDSPsclsvaEIRESFdawqrartnrnqdgnkddlkepgkgk 176 Cryptococcus ne...
AAF46445      98 YVIDSNDReRMEESKAIFDKMIknelLSGVPLLILANKQDLPdvmgvrEIKPVFqqaga--------------------- 156 fruit fly
NP_015274     97 FIVDSSDReRLDECSTTLQSVVmdeeIEGVPILMLANKQDRQdrmevqDIKEVFnkiae--------------------- 155 baker's yeast
AAV38469      98 YVIDSTDEeRLAESKQAFEKVVtseaLCGVPVLVLANKQDVEtclsipDIKTAFsdcts--------------------- 156 human
AAH54219      98 YVIDSTDEtRLSESKHAFERMIssesLEGVPILVLANKQDVEgclsipDVKTAFsdcin--------------------- 156 African clawed ...
XP_638926     97 YVVDSSDKeRFNESKDELEIVIndskLKDVPLLLFFNKQDLPdsetieYLSSVFksviqscqlsnstd------------ 164 Dictyostelium d...
AAA87882      97 YLIDAACPtRFEDSKSALEKALrhedLQGAPLLILANKQDLTnavsaeELDRYLdlkk---------------------- 154 thale cress
NP_001013307  98 YVIDSTDEeRLGESKNAFEKMIsseaLEGVPLLVLANKQDVEnclsvpDIKTAFsdcap--------------------- 156 zebrafish
NP_491094     98 FVVDATRSdLFPIVASQFKEVManeiVQNIPVLVAVNKSEMEgaaaaaEVRMLLedd----------------------- 154 Caenorhabditis ...
Feature 1                                                ###               
EAL31986     157 ----------------------------ligrRDCLTIPVSALTGEGVDEGIKWLVEA 186 Drosophila pseudoobscura
AAW26226     157 ----------------------------lvgqRQCTFHGVSALNGEGINSSIKWIVDK 186 Schistosoma japonicum
EAL17716     177 aplkeadepretdasrtegqgwddggakeermASLDVMGVSALEGTGVSDAINWLYIR 234 Cryptococcus neoformans var. neoforma...
AAF46445     157 ----------------------------ligrRDCLTIPVSALHGEGVDEGIKWLVEA 186 fruit fly
NP_015274    156 ----------------------------hisaRDSRVLPISALTGEGVKDAIEWMIVR 185 baker's yeast
AAV38469     157 ----------------------------kigrRDCLTQACSALTGKGVREGIEWMVKC 186 human
AAH54219     157 ----------------------------kigkRDCLTQACSALSGTGLNEGVEWMVKC 186 African clawed frog
XP_638926    165 -------------------qlsslsssspittRNVQLQPLIACKGEGLEQGINWLSDC 203 Dictyostelium discoideum
AAA87882     155 -----------------------------ldeRVYMFEAVSGYDGRGIKESIEWLVGV 183 thale cress
NP_001013307 157 ----------------------------kigkRDCLVQPCAALSGYVICSSDYGGYTE 186 zebrafish
NP_491094    155 -----------------------------nhrSDLAVLPVSALEGTNIERCVHWIVRS 183 Caenorhabditis elegans

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