Conserved Protein Domain Family
SAA

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pfam00277: SAA 
Serum amyloid A protein
The serum amyloid A (SAA) proteins comprise a family of vertebrate amphipathic alpha-helical apolipoproteins that associate predominantly with high density lipoproteins (HDL). They play a role in the mobilization of cholesterol for tissue repair and regeneration. The synthesis of these proteins is greatly increased (as much as a 1000 fold) in inflammation, being a major acute phase reactant together with C-reactive protein. They act as cytokine-like proteins that are involved in cell-cell communication and in inflammatory, immunologic, neoplastic and protective pathways. Prolonged elevation of plasma SAA levels, as in chronic inflammation, results in a pathological condition, called amyloidosis, which is characterized by the highly insoluble accumulation of SAA in several tissues. During chronic inflammation, SAA association with HDL can change its protein and lipid composition which abrogates the HDL anti-atherogenic properties, contributing to a pro-atherogenic state.
Statistics
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PSSM-Id: 459744
Aligned: 22 rows
Threshold Bit Score: 144.003
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CBL43865     574 VDYTVGAIGGAADFVDNYGDMRDANTIGGDKYFHCKANCEAAQRGQGGQDAARCISDSREWFDQHWpKNDPPSASAADQV 653
Q4SI54        21 YKFPGQAVRGSHDMYRAYRDMRKANWKNSDKYFHARGNYDAAQRGPGGRWAAKVISDAREWAQQKT--GRGASDSAADQA 98  spotted green p...
Q642J9        21 YRFPGEAAGGAKDMWRAYQHMKEANWKNSDKYFHARGNYEAAQRGPGGYWAAKVISDGREALQGLI--RRGNSDAAADQE 98  zebrafish
XP_006642759  21 YMFPVEAARGAGDMWSAYDDMREANWKNSDKYFHARGNRDAASRGPGGKWAAEVISNAREWWQGSA-SGRGHEDTEADQE 99 
EEN48139      43 VDRTREAAQGAGDMYSAYRDMRESNWRNSDKYFHARGNYDAAQRGPGGRWAAEVISNAREGYQSGL-SGQGEVDTRADQE 121
XP_011679821  36 GDFVSGAVRGAGDMWRSYSDMREANTIGADKYFHARGNYEASQRGSGGRFAARVISDAREGWQGGV-SGRGAKDTQADQE 114
Q12LF8        55 VLNQRQWIGGAYDFFGNYRDMRDANTIGADKYFHCKANCEATKRGKGGESAACTISDSREWFDQHI-KGDPA--SAADQA 131 Shewanella deni...
XP_016154381  31 GQFVRDAAGGTRDMYRAYKDMREANYRGADKYFHARGNYDAARRGPGGAWAARVISDARENWQSRV-SGRGAEDTRADQE 109
XP_016278912 109 ARFVKEAGQGAGDMWRAYRDMREANYKNSDKYFHARGNYDAARRGPGGAWAARVISDGREFFQGGS-SGRGVEDSRADQF 187 gray short-tail...
XP_028917567  46 grfIKETGQGSWDMWNAHSDMREVNFKNSDKYFHARGNYDAAKRGPGGAWAAEIISDGREFLQETF--GRGMEDLLADQE 123 platypus
CBL43865     654 ANLYGRTQGAENTggncqqicapFRPNGLPSQY 686
Q4SI54        99 ANRWGRNGGNPNV----------YRPRGLPRRY 121 spotted green pufferfish
Q642J9        99 ANLWGRNGGDPNK----------YRPKGLPIKY 121 zebrafish
XP_006642759 100 ANRWGRDGGDLSK----------YRPKDLPEKY 122
EEN48139     122 ANNWGRNGGDPNR----------YRPEGLPDRY 144
XP_011679821 115 ANRWGRNGGDPNR----------YRPAGLPDGY 137
Q12LF8       132 ANIFGRSNASSPQscsl--vcsaFRPNGLPQGY 162 Shewanella denitrificans OS217
XP_016154381 110 ANRWGRSGGDPNR----------YRPRGLPSKY 132
XP_016278912 188 ANRWGRSGKDPNF----------FRPPGLPSKY 210 gray short-tailed opossum
XP_028917567 124 ANRHGRSGGDPNH----------CRPAGLDEKY 146 platypus
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